| Literature DB >> 26373543 |
Danon Clemes Cardoso1,2,3, Maykon Passos Cristiano4,5, Mara Garcia Tavares6, Christoph D Schubart7, Jürgen Heinze8.
Abstract
Entities:
Year: 2015 PMID: 26373543 PMCID: PMC4571116 DOI: 10.1186/s12862-015-0444-8
Source DB: PubMed Journal: BMC Evol Biol ISSN: 1471-2148 Impact factor: 3.260
Genetic diversity and neutrality tests for each population and with all populations of M. simplex together
| Populations | Nucleotide diversity (π) (± S.D.) | Haplotype diversity ( | Tajima's | Fu's FS |
|---|---|---|---|---|
| RS1 | 0.00189 (0.00090) | 0.667 (0.163) | −1.87333 ( | −1.11562 ( |
| RS2 | 0.00224 (0.00054) | 0.889 (0.091) | −0.6299 ( | −2.32907 ( |
| RS3 | 0.00276 (0.00055) | 0.933 (0.077) | −1.50661 ( | −4.46904 ( |
| SC4 | 0.00181 (0.00024) | 0.818 (0.083) | 0.43329 ( | −1.02733 ( |
| SC5 | 0.00268 (0.00036) | 0.890 (0.060) | −1.09063 ( | −2.8844 ( |
| SC6 | 0.00336 (0.00039) | 0.709 (0.099) | 1.52257 ( | 1.62676 ( |
| SC7 | 0.00387 (0.00064) | 0.709 (0.137) | 1.49895 ( | 0.7727 ( |
| SC8 | 0.00346 (0.00042) | 0.873 (0.089) | 1.00501 ( | −1.68615 ( |
| SC9 | 0.00368 (0.00059) | 0.833 (0.098) | 0.92757 ( | 0.12678 ( |
| NE10 | 0.00339 (0.00038) | 0.697 (0.090) | 1.68302 ( | 1.85074 ( |
| All populations | 0.00346 (0.00019) | 0.865 (0.022) | −1.47062 ( | −21.59803 ( |
Cardoso et al.
Cardoso et al. BMC Evolutionary Biology 2015 15:106 doi:10.1186/s12862-015-0383-4
- Φ values for pairwise comparisons between population of M. simplex (lower left) and p values (upper right)
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| - | 0.54618 | 0.01228 | 0.04633 | 0.18008 | 0.01792 | 0.01594 | 0.04841 | 0.08653 | 0.0492 |
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| 0.01856a | - | 0.01683 | 0.00515 | 0.0302 | 0.02624 | 0.01465 | 0.04742 | 0.09554 | 0.0592 |
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| - | 0.27888 | 0.02287 | 0.00386 | 0.00337 | 0.00485 | 0.01297 | 0.00941 |
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| 0.01451b | - | 0.08455 | 0.00356 | 0.00297 | 0.00752 | 0.01733 | 0.01129 |
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| 0.02839 |
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| 0.07119b | - | 0.00069 | 0.0004 | 0.00168 | 0.00713 | 0.00614 |
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| - | 0.78299 | 0.92516 | 0.6338 | 0.83912 |
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| 0.05903c | - | 0.59489 | 0.43421 | 0.47352 |
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| 0.06991c | 0.03956c | - | 0.93931 | 0.77794 |
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| 0.13621 | 0.12338 |
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| 0.06591c | 0.0298c | 0.08068c | - | 0.94852 |
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| 0.07182c | 0.03535c | 0.06859c | 0.0855c | - |
Population names are given in the Table 1. The colors show the shallow phylogeographic structure found: southern populations (a), central-eastern population (b) and northern populations (c)
Bold values are significant at P < 0.05
Cardoso et al.
Cardoso et al. BMC Evolutionary Biology 2015 15:106 doi:10.1186/s12862-015-0383-4