| Literature DB >> 26366189 |
A J Both1, L Benjamin2, J Franklin2, G Holroyd3, L D Incoll4, M G Lefsrud5, G Pitkin6.
Abstract
Entities:
Keywords: Data sharing; International standards; Quality assurance; Science communication
Year: 2015 PMID: 26366189 PMCID: PMC4567830 DOI: 10.1186/s13007-015-0083-5
Source DB: PubMed Journal: Plant Methods ISSN: 1746-4811 Impact factor: 4.993
Instruments and sensors for measurement and their calibration
| What to measure | Units | Measured by | Precision of instrumentb | Accuracy of readingb | Calibrated by and when |
|---|---|---|---|---|---|
| Radiation (PARa) | µmol m−2 s−1 | Quantum sensor | ±1 % | ±10 % | Comparison with a reference sensor or against a standard quartz-halogen lamp traceable to a (inter)national standard (e.g. US NIST). Once per annum |
| Radiation (net) | W m−2 | Net radiometer | ±2 % | ±5 % | Comparison with a reference meter or in a temperature controlled calibration chamber capable of evaluating short and long wavebands. Once per annum |
| Radiation (spectral) | µmol m−2 s−1 nm−1 | Spectroradiometer | ±1 % | ±5 % | Comparison with a reference meter or against a standard source of radiation (e.g. ASTM G138-06). Once per annum |
| Irradiance (solar) | W m−2 | Pyranometer | ±1 % | ±5 % | Comparison with a reference meter or against a standard source (traceable to the World Radiometric Reference) in an integrating sphere. Once per annum |
| Radiation (integral) | MJ m−2 d−1 or mol m−2 d−1 | Calculated from accumulated radiation data | – | – | – |
| Air temperature | °C | RTD, thermocouple or thermistor (shaded and aspirated in air with speed ≥3 m s−1) | ±0.1 °C | ±0.2 °C | Comparison with a reference thermometer (e.g. traceable against US NIST) by placing in melting crushed ice and boiling distilled water. Once per annum |
| Substrate temperature | °C | RTD, thermocouple or thermistor (ensure good contact with substrate) | ±0.1 °C | ±0.2 °C | As above |
| Surface temperature | °C | Infrared temperature sensor, fine wire thermocouple | ±0.1 °C | ±0.2 °C | Infrared sensor: Comparison with a reference surface thermometer mounted on the same surface within the field of view of the infrared sensor |
| Atmospheric moisture: relative humidity or vapour pressure deficit (VPD) | % or kPa | Capacitance, dewpoint sensor, psychrometer, or IRGA (infrared gas analyser) | Relative humidity: ±2 % | ±5 % | Humidity generator; unsaturated salt solution calibration standards (35 and 80% RH). Once per annum |
| Air speed | m s−1 | Anemometer (range 0.1–15.0 m s−1) | ±2 % | ±5 % | Wind tunnel. Once per annum |
| pH | – | pH probe (range 3–10) | ±0.1 pH | ±0.1 pH | Standard solutions. Before every measurement, or weekly in continuous measurement applications |
| Electrical conductivity (EC) | S m−1 | Electrical conductivity meter | ±3 % | ±5 % | As above |
| Dissolved oxygen | mg L−1 | Dissolved oxygen meter (maintain adequate solution flow rate and ensure temperature compensation) | ±3 % | ±5 % | As above |
| Atmospheric CO2 concentration | µmol mol−1 | Silicon based NDIR (non-dispersive infrared) sensor as part of an IRGA (infrared gas analyser) | ±1 % | ±3 % | Certified calibration gases for low and high end of the measurement range, and/or precision gas mixing instrument. Once per week |
Referred to as photosynthetically active radiation (PAR: 400–700 nm) for general usage and described as photosynthetic photon flux density (PPFD) by many journals, professional societies and manufacturers of quantum sensors.
Precision is how close the measured values are to each other. Accuracy is how close a measured value is to the actual (true) value.
Fig. 1A quantum sensor on a leveling platform mounted at the top of the canopy for measuring photosynthetically active radiation (PAR). Radiation sensors should be chosen for the specific purpose required. Positioning should be carefully considered to avoid shading or noise from reflective surfaces.
Fig. 2Water vapour (humidity) sensors may be relatively inexpensive capacitance hygrometers (left) or a basic psychrometer (right).
Fig. 3An aspirated sensor box suspended centrally in free air for recording environmental parameters. The sensors are located inside the box while air is constantly drawn through the box. Sensor (box) type and location along with frequency of sampling and details of data integration should be reported.
Primary parameters
| What to measure | Units | Where to measure | When to measure | What to report |
|---|---|---|---|---|
| (a) Minimum set | ||||
| Air temperaturea | oC | At canopy level, in centre of growing area. Location of sensor is crucial and should be independent of the greenhouse temperature control sensor. Include another sensor for outside temperature | Preferably continuous, but at least hourly | Mean and standard deviation for light and dark periods. Number of locations (preferably more than one) |
| Substrate temperature | oC | Centre of root matrix for solid and liquid substrates | As above | As above |
| Radiation (PARa) | µmol m−2 s−1 | At top of canopy, in centre of growing area | Preferably continuous but at least hourly | Mean and standard deviation. Number of measurement locations (preferably more than one). When used, supplementary radiation sources (type, model and manufacturer, distribution, energy consumption, conversion efficiency), and their duration of operation |
| Photoperiod | h | – | Daily or when conditions change | Duration of light period (including any night interruption) |
| Atmospheric moisture: relative humidity or vapour pressure deficit (VPD) | % or kPa | At canopy level, in centre of growing area and independently of the greenhouse humidity control sensor | Preferably continuous but at least hourly | Mean and standard deviation for light and dark periods. Number of locations (preferably more than one) |
| Atmospheric CO2 concentrationb | µmol mol−1 | At canopy level, at a representative location | Preferably continuous but at least hourly if CO2 enrichment is used | Mean and standard deviation/Number of measurement points and their location relative to the plant canopy |
| pH | – | In root zone environment, or in nutrient solution directly applied to the root zone environment | Preferably continuous, but at least hourly | Mean and standard deviation, Location of measurement(s) |
| Electrical conductivity (EC) | S m−1 | In root zone environment, or in nutrient solution directly applied to the root zone environment | Preferably continuous, but at least hourly | Mean and standard deviation, Location of measurement(s) |
| Nutrient—liquid media | mmol L−1 | – | Daily or when replenished | Ionic concentration in added solution. Frequency of additions. Aeration if any |
| Nutrient—solid media | mol kg−1 (dry) | – | When added or replenished | Nutrients and their form added to soil media. Frequency of additions |
| Watering | Litre (L) | Growing system | At start of experiment and when changed | Frequency, amount, duration and type of water added per unit area or per plant. Mean and standard deviation. Type of irrigation system |
| Plant alignment | – | On bench/floor/hanging system | At start of experiment and when conditions change | Number of plants per unit area and number of re-spacings or relocations |
| Greenhouse properties | Greenhouse | At start of experiment | Latitude and longitude. Orientation of long axis relative to compass North. Size (floor area m2, growing area m2, gutter height m, peak height m), type (free standing, gutter connected), shape (curved roof, peaked roof). Manufacturer and model if available, indicate if it has special features (e.g. type of glazing material, energy/shade curtain) | |
| (b) Additional parameters | ||||
| Surface temperature b | oC | Plant tissue: pointed at canopy or individual leaf surface. Greenhouse: pointed at structural surface | Preferably continuous, but at least hourly | Mean and standard deviation. Location and orientation of the sensor. Distance of the sensor to the surface measured. Field of view of the sensor |
| Radiation (net) | W m−2 | At top of canopy, in centre of growing area | As above | Mean and standard deviation. If measured, also report solar radiation so that (net) long wave radiation can be determined |
| Radiation (spectral) | µmol m−2 s−1
| As above and/or where of interest (e.g. within the canopy) | As often as practical | Mean and standard deviation. Absolute or relative contribution of a specific wavelength or waveband to the overall radiation |
| Irradiance (solar) | W m−2 | Outside (unobstructed) and/or inside (at top of canopy, in centre of growing area) | Preferably continuous, but at least hourly | Mean and standard deviation. When possible, calculate (average) transmission of radiation through the greenhouse cover |
| Radiation (integral) | MJ m−2 d−1 or mol m−2 d−1 | Calculated from accumulated data | Continuously during the measurement interval | Accumulated (typically daily) values. Relative contributions of supplementary and solar radiation to (daily) integral |
| Air circulation | m s−1 | At canopy level | At start of experiment and more frequently if conditions change | Mean and standard deviation Design of circulation system. Predominant direction of flow. Number of measurement points and their location relative to the plant canopy. Report whether open or closed greenhouse |
| Substrate water content: volumetric or gravimetric water content, or matric potential | % or kPa | Substrate | Daily | Mean and standard deviation. Number of measurement locations |
| Dissolved oxygen | mg L−1 | In root zone environment, or in nutrient solution directly applied to the root zone environment | Preferably continuous, but at least hourly | Mean and standard deviation. Location of measurement(s) |
Referred to as photosynthetically active radiation (PAR: 400–700 nm) for general usage and described as photosynthetic photon flux density (PPFD) by many journals, professional societies and manufacturers of quantum sensors.
Report if records are available, and always when it is a variable under investigation.
Fig. 4Greenhouse environmental control systems are diverse and frequently control algorithms are specific to the particular size, structure, orientation and location of the facility. Pertinent information on the system should be reported.