Literature DB >> 26361769

Simultaneous interactions of pyrimidine ring with BeF2 and BF3 in BeF2⋅⋅⋅X-Pyr⋅⋅⋅BF3 complexes: non-cooperativity.

Saber Ghafari1, Alireza Gholipour2.   

Abstract

We investigated the mutual interplay between beryllium and boron bonds in the BeF2⋅⋅⋅X-Pyr⋅⋅⋅BF3 complexes (X = CN, F, Cl, Br, H, CH3, OH and NH2, where Pyr and ⋅⋅⋅ denote pyrimidine ring and beryllium and boron bonds, respectively) at the M06-2X/aug-cc-pVDZ level of theory. The results indicate that non-cooperative effects are observed when the two kinds of noncovalent interactions beryllium and boron bonds coexist in the complexes. These effects were studied in terms of the energetic and geometric features of the complexes. Atoms in molecules (AIM) and natural bond orbital (NBO) analyses were also performed to unveil the mechanism of these interactions in the title complexes. The electron-withdrawing/donating substituents decrease/increase the magnitude of the binding energies compared to the unsubstituted BeF2⋅⋅⋅X-Pyr⋅⋅⋅BF3 (X = H) complex. The Esynvalues are in agreement with the geometric features of the complexes. The results stress the importance of the mutual effects between noncovalent interactions involving aromatic systems.

Entities:  

Keywords:  Atoms in molecules; Mutual interplay; Natural bond orbital; Non-cooperative effects

Mesh:

Substances:

Year:  2015        PMID: 26361769     DOI: 10.1007/s00894-015-2795-x

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  12 in total

1.  Design of Density Functionals by Combining the Method of Constraint Satisfaction with Parametrization for Thermochemistry, Thermochemical Kinetics, and Noncovalent Interactions.

Authors:  Yan Zhao; Nathan E Schultz; Donald G Truhlar
Journal:  J Chem Theory Comput       Date:  2006-03       Impact factor: 6.006

2.  Cooperativity in beryllium bonds.

Authors:  Ibon Alkorta; José Elguero; Manuel Yáñez; Otilia Mó
Journal:  Phys Chem Chem Phys       Date:  2014-03-07       Impact factor: 3.676

3.  Cooperativity of pi-stacking and hydrogen bonding interactions and substituent effects on X-ben//pyr...H-F complexes.

Authors:  Ali Ebrahimi; Mostafa Habibi; Razieh Sadat Neyband; Ali Reza Gholipour
Journal:  Phys Chem Chem Phys       Date:  2009-10-20       Impact factor: 3.676

4.  Using beryllium bonds to change halogen bonds from traditional to chlorine-shared to ion-pair bonds.

Authors:  Ibon Alkorta; José Elguero; Otilia Mó; Manuel Yáñez; Janet E Del Bene
Journal:  Phys Chem Chem Phys       Date:  2014-12-08       Impact factor: 3.676

5.  Mathematical modeling and physical reality in noncovalent interactions.

Authors:  Peter Politzer; Jane S Murray; Timothy Clark
Journal:  J Mol Model       Date:  2015-02-20       Impact factor: 1.810

6.  Structure, bonding, and energetic properties of nitrile-borane complexes: RCN-BH3.

Authors:  Elizabeth L Smith; Daniel Sadowsky; Christopher J Cramer; James A Phillips
Journal:  J Phys Chem A       Date:  2011-02-22       Impact factor: 2.781

7.  Condensed-phase effects on the structural properties of C6H5CN-BF3 and (CH3)3CCN-BF3: IR spectra, crystallography, and computations.

Authors:  J A Phillips; D J Giesen; N P Wells; J A Halfen; C C Knutson; J P Wrass
Journal:  J Phys Chem A       Date:  2005-09-15       Impact factor: 2.781

8.  Gas-phase ion chemistry of BF(3)/NH(3) mixtures.

Authors:  Federico Pepi; Andreina Ricci; Stefania Garzoli; Marzio Rosi
Journal:  J Phys Chem A       Date:  2006-11-16       Impact factor: 2.781

9.  A short yet very weak dative bond: structure, bonding, and energetic properties of N(2)-BH(3).

Authors:  Elizabeth L Smith; Daniel Sadowsky; James A Phillips; Christopher J Cramer; David J Giesen
Journal:  J Phys Chem A       Date:  2010-02-25       Impact factor: 2.781

10.  Beryllium Bonds, Do They Exist?

Authors:  Manuel Yáñez; Pablo Sanz; Otilia Mó; Ibon Alkorta; José Elguero
Journal:  J Chem Theory Comput       Date:  2009-09-28       Impact factor: 6.006

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.