Literature DB >> 2635610

Structure of 7-methyl-8-oxo-7,8-dihydroguanosine monohydrate.

S B Larson1, H B Cottam, R K Robins.   

Abstract

2-Amino-7-methyl-9-(beta-D-ribofuranosyl)-1H,9H-purine-6,8-dione monohydrate, C11H15-N5O6.H2O, Mr = 331.29, orthorhombic, P212121, a = 6.9811 (6), b = 9.808 (2), c = 20.61 (2) A, V = 1411.1 (13) A3, Z = 4, Dx = 1.559 g cm-3, Cu Kalpha, lambda = 1.54178 A, mu = 10.825 cm-1, F(000) = 696, T = 295 K, R = 0.0296 for 2472 reflections (F greater than or equal to 4 sigma F). The sugar conformation and puckering parameters are 2E (C2'-endo), P = 161.8 degrees and tau m = 39.2 degrees. The side chain is gauche-gauche. The glycosidic torsion angle is 65.1 (2) degrees corresponding to the syn conformation which is stabilized by the O5'--H...N3 intramolecular hydrogen bond. The purine ring is nearly planar [r.m.s. deviation: 0.014 (2) A]; the dihedral angle between the pyrimidine and imidazole rings is 1.14 (8) degrees.

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Year:  1989        PMID: 2635610     DOI: 10.1107/s010827018900301x

Source DB:  PubMed          Journal:  Acta Crystallogr C        ISSN: 0108-2701            Impact factor:   1.172


  1 in total

1.  Crystal and molecular structure of a benzo[a]pyrene 7,8-diol 9,10-epoxide N2-deoxyguanosine adduct: absolute configuration and conformation.

Authors:  Isabella L Karle; Haruhiko Yagi; Jane M Sayer; Donald M Jerina
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-02       Impact factor: 11.205

  1 in total

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