Literature DB >> 26354919

Predicting the Dynamics of Network Connectivity in the Neocortex.

Yonatan Loewenstein1, Uri Yanover2, Simon Rumpel3.   

Abstract

Dynamic remodeling of connectivity is a fundamental feature of neocortical circuits. Unraveling the principles underlying these dynamics is essential for the understanding of how neuronal circuits give rise to computations. Moreover, as complete descriptions of the wiring diagram in cortical tissues are becoming available, deciphering the dynamic elements in these diagrams is crucial for relating them to cortical function. Here, we used chronic in vivo two-photon imaging to longitudinally follow a few thousand dendritic spines in the mouse auditory cortex to study the determinants of these spines' lifetimes. We applied nonlinear regression to quantify the independent contribution of spine age and several morphological parameters to the prediction of the future survival of a spine. We show that spine age, size, and geometry are parameters that can provide independent contributions to the prediction of the longevity of a synaptic connection. In addition, we use this framework to emulate a serial sectioning electron microscopy experiment and demonstrate how incorporation of morphological information of dendritic spines from a single time-point allows estimation of future connectivity states. The distinction between predictable and nonpredictable connectivity changes may be used in the future to identify the specific adaptations of neuronal circuits to environmental changes. The full dataset is publicly available for further analysis. Significance statement: The neural architecture in the neocortex exhibits constant remodeling. The functional consequences of these modifications are poorly understood, in particular because the determinants of these changes are largely unknown. Here, we aimed to identify those modifications that are predictable from current network state. To that goal, we repeatedly imaged thousands of dendritic spines in the auditory cortex of mice to assess the morphology and lifetimes of synaptic connections. We developed models based on morphological features of dendritic spines that allow predicting future turnover of synaptic connections. The dynamic models presented in this paper provide a quantitative framework for adding putative temporal dynamics to the static description of a neuronal circuit from single time-point connectomics experiments.
Copyright © 2015 the authors 0270-6474/15/3512535-10$15.00/0.

Entities:  

Keywords:  connectome; dendritic spines; synaptic dynamics

Mesh:

Year:  2015        PMID: 26354919      PMCID: PMC6605403          DOI: 10.1523/JNEUROSCI.2917-14.2015

Source DB:  PubMed          Journal:  J Neurosci        ISSN: 0270-6474            Impact factor:   6.167


  43 in total

1.  Long-term in vivo imaging of experience-dependent synaptic plasticity in adult cortex.

Authors:  Joshua T Trachtenberg; Brian E Chen; Graham W Knott; Guoping Feng; Joshua R Sanes; Egbert Welker; Karel Svoboda
Journal:  Nature       Date:  2002 Dec 19-26       Impact factor: 49.962

2.  Transient and persistent dendritic spines in the neocortex in vivo.

Authors:  Anthony J G D Holtmaat; Joshua T Trachtenberg; Linda Wilbrecht; Gordon M Shepherd; Xiaoqun Zhang; Graham W Knott; Karel Svoboda
Journal:  Neuron       Date:  2005-01-20       Impact factor: 17.173

3.  Cascade models of synaptically stored memories.

Authors:  Stefano Fusi; Patrick J Drew; L F Abbott
Journal:  Neuron       Date:  2005-02-17       Impact factor: 17.173

4.  Experience-dependent and cell-type-specific spine growth in the neocortex.

Authors:  Anthony Holtmaat; Linda Wilbrecht; Graham W Knott; Egbert Welker; Karel Svoboda
Journal:  Nature       Date:  2006-06-22       Impact factor: 49.962

5.  Spine growth precedes synapse formation in the adult neocortex in vivo.

Authors:  Graham W Knott; Anthony Holtmaat; Linda Wilbrecht; Egbert Welker; Karel Svoboda
Journal:  Nat Neurosci       Date:  2006-08-06       Impact factor: 24.884

6.  Development of long-term dendritic spine stability in diverse regions of cerebral cortex.

Authors:  Yi Zuo; Aerie Lin; Paul Chang; Wen-Biao Gan
Journal:  Neuron       Date:  2005-04-21       Impact factor: 17.173

7.  Imaging neuronal subsets in transgenic mice expressing multiple spectral variants of GFP.

Authors:  G Feng; R H Mellor; M Bernstein; C Keller-Peck; Q T Nguyen; M Wallace; J M Nerbonne; J W Lichtman; J R Sanes
Journal:  Neuron       Date:  2000-10       Impact factor: 17.173

8.  Remodeling of synaptic structure in sensory cortical areas in vivo.

Authors:  Ania K Majewska; Jessica R Newton; Mriganka Sur
Journal:  J Neurosci       Date:  2006-03-15       Impact factor: 6.167

9.  Long-term dendritic spine stability in the adult cortex.

Authors:  Jaime Grutzendler; Narayanan Kasthuri; Wen-Biao Gan
Journal:  Nature       Date:  2002 Dec 19-26       Impact factor: 49.962

10.  Highly nonrandom features of synaptic connectivity in local cortical circuits.

Authors:  Sen Song; Per Jesper Sjöström; Markus Reigl; Sacha Nelson; Dmitri B Chklovskii
Journal:  PLoS Biol       Date:  2005-03-01       Impact factor: 8.029

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  25 in total

1.  Reduced sensory-evoked structural plasticity in the aging barrel cortex.

Authors:  Rebecca L Voglewede; Kaeli M Vandemark; Andrew M Davidson; Annie R DeWitt; Marissa D Heffler; Emma H Trimmer; Ricardo Mostany
Journal:  Neurobiol Aging       Date:  2019-06-26       Impact factor: 4.673

Review 2.  Spine dynamics in the brain, mental disorders and artificial neural networks.

Authors:  Haruo Kasai; Noam E Ziv; Hitoshi Okazaki; Sho Yagishita; Taro Toyoizumi
Journal:  Nat Rev Neurosci       Date:  2021-05-28       Impact factor: 34.870

Review 3.  Computational principles of memory.

Authors:  Rishidev Chaudhuri; Ila Fiete
Journal:  Nat Neurosci       Date:  2016-03       Impact factor: 24.884

4.  Structural Analysis of Human and Mouse Dendritic Spines Reveals a Morphological Continuum and Differences across Ages and Species.

Authors:  Netanel Ofer; Ruth Benavides-Piccione; Javier DeFelipe; Rafael Yuste
Journal:  eNeuro       Date:  2022-06-08

5.  A Dynamic Connectome Supports the Emergence of Stable Computational Function of Neural Circuits through Reward-Based Learning.

Authors:  David Kappel; Robert Legenstein; Stefan Habenschuss; Michael Hsieh; Wolfgang Maass
Journal:  eNeuro       Date:  2018-04-24

6.  Ultrastructural analysis of dendritic spine necks reveals a continuum of spine morphologies.

Authors:  Netanel Ofer; Daniel R Berger; Narayanan Kasthuri; Jeff W Lichtman; Rafael Yuste
Journal:  Dev Neurobiol       Date:  2021-05-30       Impact factor: 3.964

7.  Stable but not rigid: Chronic in vivo STED nanoscopy reveals extensive remodeling of spines, indicating multiple drivers of plasticity.

Authors:  Heinz Steffens; Alexander C Mott; Siyuan Li; Waja Wegner; Pavel Švehla; Vanessa W Y Kan; Fred Wolf; Sabine Liebscher; Katrin I Willig
Journal:  Sci Adv       Date:  2021-06-09       Impact factor: 14.136

8.  Oscillations via Spike-Timing Dependent Plasticity in a Feed-Forward Model.

Authors:  Yotam Luz; Maoz Shamir
Journal:  PLoS Comput Biol       Date:  2016-04-15       Impact factor: 4.475

9.  Network Plasticity as Bayesian Inference.

Authors:  David Kappel; Stefan Habenschuss; Robert Legenstein; Wolfgang Maass
Journal:  PLoS Comput Biol       Date:  2015-11-06       Impact factor: 4.475

Review 10.  Opposing Effects of Neuronal Activity on Structural Plasticity.

Authors:  Michael Fauth; Christian Tetzlaff
Journal:  Front Neuroanat       Date:  2016-06-28       Impact factor: 3.856

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