Literature DB >> 26353219

Low Bias Local Intrinsic Dimension Estimation from Expected Simplex Skewness.

Kerstin Johnsson, Charlotte Soneson, Magnus Fontes.   

Abstract

In exploratory high-dimensional data analysis, local intrinsic dimension estimation can sometimes be used in order to discriminate between data sets sampled from different low-dimensional structures. Global intrinsic dimension estimators can in many cases be adapted to local estimation, but this leads to problems with high negative bias or high variance. We introduce a method that exploits the curse/blessing of dimensionality and produces local intrinsic dimension estimators that have very low bias, even in cases where the intrinsic dimension is higher than the number of data points, in combination with relatively low variance. We show that our estimators have a very good ability to classify local data sets by their dimension compared to other local intrinsic dimension estimators; furthermore we provide examples showing the usefulness of local intrinsic dimension estimation in general and our method in particular for stratification of real data sets.

Year:  2015        PMID: 26353219     DOI: 10.1109/TPAMI.2014.2343220

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  3 in total

1.  Role of hypothalamic MAPK/ERK signaling and central action of FGF1 in diabetes remission.

Authors:  Jenny M Brown; Marie A Bentsen; Dylan M Rausch; Bao Anh Phan; Danielle Wieck; Huzaifa Wasanwala; Miles E Matsen; Nikhil Acharya; Nicole E Richardson; Xin Zhao; Peng Zhai; Anna Secher; Gregory J Morton; Tune H Pers; Michael W Schwartz; Jarrad M Scarlett
Journal:  iScience       Date:  2021-08-04

2.  pipeComp, a general framework for the evaluation of computational pipelines, reveals performant single cell RNA-seq preprocessing tools.

Authors:  Pierre-Luc Germain; Anthony Sonrel; Mark D Robinson
Journal:  Genome Biol       Date:  2020-09-01       Impact factor: 13.583

3.  Manifold-adaptive dimension estimation revisited.

Authors:  Zsigmond Benkő; Marcell Stippinger; Roberta Rehus; Attila Bencze; Dániel Fabó; Boglárka Hajnal; Loránd G Eröss; András Telcs; Zoltán Somogyvári
Journal:  PeerJ Comput Sci       Date:  2022-01-06
  3 in total

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