Literature DB >> 26348961

RNA structure from deep sequencing.

Eric Westhof1.   

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Year:  2015        PMID: 26348961     DOI: 10.1038/nbt.3338

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


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  6 in total

1.  Geometric nomenclature and classification of RNA base pairs.

Authors:  N B Leontis; E Westhof
Journal:  RNA       Date:  2001-04       Impact factor: 4.942

2.  Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning.

Authors:  Babak Alipanahi; Andrew Delong; Matthew T Weirauch; Brendan J Frey
Journal:  Nat Biotechnol       Date:  2015-07-27       Impact factor: 54.908

3.  Genome-wide profiling of in vivo RNA structure at single-nucleotide resolution using structure-seq.

Authors:  Yiliang Ding; Chun Kit Kwok; Yin Tang; Philip C Bevilacqua; Sarah M Assmann
Journal:  Nat Protoc       Date:  2015-06-18       Impact factor: 13.491

4.  Methods for processing high-throughput RNA sequencing data.

Authors:  Manuel Ares
Journal:  Cold Spring Harb Protoc       Date:  2014-11-03

5.  Genome-wide measurement of RNA secondary structure in yeast.

Authors:  Michael Kertesz; Yue Wan; Elad Mazor; John L Rinn; Robert C Nutter; Howard Y Chang; Eran Segal
Journal:  Nature       Date:  2010-09-02       Impact factor: 49.962

6.  RNA secondary structure modeling at consistent high accuracy using differential SHAPE.

Authors:  Greggory M Rice; Christopher W Leonard; Kevin M Weeks
Journal:  RNA       Date:  2014-04-17       Impact factor: 4.942

  6 in total

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