Literature DB >> 26344854

The structural basis of substrate promiscuity in UDP-hexose 4-epimerase from the hyperthermophilic Eubacterium Thermotoga maritima.

Sun-Mi Shin1, Jin Myung Choi2, Eric di Luccio3, Yong-Jik Lee1, Sang-Jae Lee4, Sang Jun Lee5, Sung Haeng Lee2, Dong-Woo Lee6.   

Abstract

UDP-galactose 4-epimerase (GalE) catalyzes the interconversion of UDP-glucose (UDP-Glc) and UDP-galactose (UDP-Gal), which is a pivotal step in the Leloir pathway for d-galactose metabolism. Although GalE is widely distributed in prokaryotes and eukaryotes, little information is available regarding hyperthermophilic GalE. We overexpressed the TM0509 gene, encoding a putative GalE from Thermotoga maritima (TMGalE), in Escherichia coli and characterized the encoded protein. To further investigate the molecular basis of this enzyme's catalytic function, we determined the crystal structures of TMGalE and TMGalE bound to UDP-Glc at resolutions of 1.9 Å and 2.0 Å, respectively. The enzyme was determined to be a homodimer with a molecular mass of 70 kDa. The enzyme could reversibly catalyze the epimerization of UDP-GalNAc/UDP-GlcNAc as well as UDP-Gal/UDP-Glc at elevated temperatures, with an apparent optimal temperature and pH of 80 °C and 7.0, respectively. Our data showed that TM0509 is a UDP-galactosugar 4-epimerase involved in d-galactose metabolism; consequently, this study provides the first detailed characterization of a hyperthermophilic GalE. Moreover, the promiscuous substrate specificity of TMGalE, which is more similar to human GalE than E. coli GalE, supports the notion that TMGalE might exhibit the earliest form of sugar-epimerizing enzymes in the evolution of galactose metabolism.
Copyright © 2015 Elsevier Inc. All rights reserved.

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Keywords:  Crystal structure; Evolution; Hyperthermophiles; Substrate specificity; UDP-galactose 4-epimerase

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Year:  2015        PMID: 26344854     DOI: 10.1016/j.abb.2015.08.025

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  2 in total

1.  Glycolipid composition of the heterocyst envelope of Anabaena sp. PCC 7120 is crucial for diazotrophic growth and relies on the UDP-galactose 4-epimerase HgdA.

Authors:  Dmitry Shvarev; Carolina N Nishi; Iris Maldener
Journal:  Microbiologyopen       Date:  2019-02-25       Impact factor: 3.139

2.  TM0416, a Hyperthermophilic Promiscuous Nonphosphorylated Sugar Isomerase, Catalyzes Various C5 and C6 Epimerization Reactions.

Authors:  Sun-Mi Shin; Thinh-Phat Cao; Jin Myung Choi; Seong-Bo Kim; Sang-Jae Lee; Sung Haeng Lee; Dong-Woo Lee
Journal:  Appl Environ Microbiol       Date:  2017-05-01       Impact factor: 4.792

  2 in total

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