Literature DB >> 26344225

Analysis and Purification of Synthetic Nucleic Acids Using HPLC.

Nanda D Sinha1, Kyeong Eun Jung2.   

Abstract

Chromatographic methods have been essential tools for analysis and purification of synthetic oligonucleotides since the 1970s. Significant developments in terms of instruments and stationary phases (media) have been made during the past several decades; among the latest are sub-micron to micron particles for the media, as well as ultra performance liquid chromatography (UPLC). Micron and sub-micron particles have increased product resolution. Applications of recently developed methods such as IP-RP-HPLC and LC-MS have been discussed for analysis, along with use of various methods for purification. Utilization of UPLC has decreased analysis time, increasing the throughput for analysis. Commonly used methods for analysis and purification of synthetic oligonucleotides have been described in this unit.
Copyright © 2013 John Wiley & Sons, Inc. All rights reserved.

Entities:  

Keywords:  HPLC; LC-MS chromatography; UPLC; anion-exchange; antisense; aptamers; ion-paired HPLC; reversed-phase; siRNA; synthetic oligonucleotides

Mesh:

Substances:

Year:  2015        PMID: 26344225     DOI: 10.1002/0471142700.nc1005s61

Source DB:  PubMed          Journal:  Curr Protoc Nucleic Acid Chem        ISSN: 1934-9270


  7 in total

1.  Synthesis of Oligodeoxynucleotides Containing a C8-2'-Deoxyguanosine Adduct Formed by the Carcinogen 3-Nitrobenzanthrone.

Authors:  Arindom Chatterjee; Chanchal K Malik; Ashis K Basu
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2017-06-19

2.  A systematic comparison of error correction enzymes by next-generation sequencing.

Authors:  Nathan B Lubock; Di Zhang; Angus M Sidore; George M Church; Sriram Kosuri
Journal:  Nucleic Acids Res       Date:  2017-09-06       Impact factor: 16.971

3.  Automated Synthesis and Purification of Guanidine-Backbone Oligonucleotides.

Authors:  Kacper Skakuj; Katherine E Bujold; Chad A Mirkin
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2020-06

Review 4.  Recent Methods for Purification and Structure Determination of Oligonucleotides.

Authors:  Qiulong Zhang; Huanhuan Lv; Lili Wang; Man Chen; Fangfei Li; Chao Liang; Yuanyuan Yu; Feng Jiang; Aiping Lu; Ge Zhang
Journal:  Int J Mol Sci       Date:  2016-12-18       Impact factor: 5.923

5.  Analyzing siRNA Concentration, Complexation and Stability in Cationic Dendriplexes by Stem-Loop Reverse Transcription-qPCR.

Authors:  Maximilian Neugebauer; Clara E Grundmann; Michael Lehnert; Felix von Stetten; Susanna M Früh; Regine Süss
Journal:  Pharmaceutics       Date:  2022-06-25       Impact factor: 6.525

6.  Determination of optical density (OD) of oligodeoxynucleotide from HPLC peak area.

Authors:  Komal Chillar; Yipeng Yin; Adikari M Dhananjani N Eriyagama; Shiyue Fang
Journal:  PeerJ Anal Chem       Date:  2022-07-07

7.  HPLC methods for purity evaluation of man-made single-stranded RNAs.

Authors:  Anastassia Kanavarioti
Journal:  Sci Rep       Date:  2019-01-31       Impact factor: 4.379

  7 in total

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