Literature DB >> 26342825

Mechanisms of microRNA turnover.

Maryam Sanei1, Xuemei Chen2.   

Abstract

MicroRNAs (miRNAs) are 20-24 nucleotide (nt) RNAs that regulate gene expression by guiding Argonaute (AGO) proteins to specific target RNAs to cause their degradation or translational repression. The abundance of miRNAs is strictly controlled at the transcriptional or post-transcriptional levels. miRNA turnover is presumably a necessary means to regulate miRNA levels in response to physiological, developmental, and environmental changes. miRNA 3' end methylation, 3' end nucleotide addition, AGO and complementary target transcripts are known or probable processes/factors that affect miRNA stability and turnover. Here we discuss the mechanisms that control miRNA turnover in plants and, where applicable, make references to similarities and differences in these mechanisms between plants and animals.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26342825      PMCID: PMC4618239          DOI: 10.1016/j.pbi.2015.07.008

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  86 in total

1.  Methylation protects microRNAs from an AGO1-associated activity that uridylates 5' RNA fragments generated by AGO1 cleavage.

Authors:  Guodong Ren; Meng Xie; Shuxin Zhang; Carissa Vinovskis; Xuemei Chen; Bin Yu
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-14       Impact factor: 11.205

Review 2.  Vive la différence: biogenesis and evolution of microRNAs in plants and animals.

Authors:  Michael J Axtell; Jakub O Westholm; Eric C Lai
Journal:  Genome Biol       Date:  2011-04-28       Impact factor: 13.583

3.  Synergistic and independent actions of multiple terminal nucleotidyl transferases in the 3' tailing of small RNAs in Arabidopsis.

Authors:  Xiaoyan Wang; Shuxin Zhang; Yongchao Dou; Chi Zhang; Xuemei Chen; Bin Yu; Guodong Ren
Journal:  PLoS Genet       Date:  2015-04-30       Impact factor: 5.917

4.  Impact of age-associated increase in 2'-O-methylation of miRNAs on aging and neurodegeneration in Drosophila.

Authors:  Masashi Abe; Ammar Naqvi; Gert-Jan Hendriks; Virzhiniya Feltzin; Yongqing Zhu; Andrey Grigoriev; Nancy M Bonini
Journal:  Genes Dev       Date:  2014-01-01       Impact factor: 11.361

5.  Mechanism of Dis3l2 substrate recognition in the Lin28-let-7 pathway.

Authors:  Christopher R Faehnle; Jack Walleshauser; Leemor Joshua-Tor
Journal:  Nature       Date:  2014-08-03       Impact factor: 49.962

6.  Mammalian DIS3L2 exoribonuclease targets the uridylated precursors of let-7 miRNAs.

Authors:  Dmytro Ustianenko; Dominika Hrossova; David Potesil; Katerina Chalupnikova; Kristyna Hrazdilova; Jiri Pachernik; Katerina Cetkovska; Stjepan Uldrijan; Zbynek Zdrahal; Stepanka Vanacova
Journal:  RNA       Date:  2013-10-18       Impact factor: 4.942

7.  Interaction between two timing microRNAs controls trichome distribution in Arabidopsis.

Authors:  Xue-Yi Xue; Bo Zhao; Lu-Men Chao; Dian-Yang Chen; Wen-Rui Cui; Ying-Bo Mao; Ling-Jian Wang; Xiao-Ya Chen
Journal:  PLoS Genet       Date:  2014-04-03       Impact factor: 5.917

8.  Semi-supervised learning for potential human microRNA-disease associations inference.

Authors:  Xing Chen; Gui-Ying Yan
Journal:  Sci Rep       Date:  2014-06-30       Impact factor: 4.379

9.  Selective microRNA uridylation by Zcchc6 (TUT7) and Zcchc11 (TUT4).

Authors:  James E Thornton; Peng Du; Lili Jing; Ljiljana Sjekloca; Shuibin Lin; Elena Grossi; Piotr Sliz; Leonard I Zon; Richard I Gregory
Journal:  Nucleic Acids Res       Date:  2014-09-15       Impact factor: 16.971

10.  The cytoplasmic poly(A) polymerases GLD-2 and GLD-4 promote general gene expression via distinct mechanisms.

Authors:  Marco Nousch; Assa Yeroslaviz; Bianca Habermann; Christian R Eckmann
Journal:  Nucleic Acids Res       Date:  2014-09-12       Impact factor: 16.971

View more
  27 in total

1.  Degradation of unmethylated miRNA/miRNA*s by a DEDDy-type 3' to 5' exoribonuclease Atrimmer 2 in Arabidopsis.

Authors:  Xiaoyan Wang; Yuan Wang; Yongchao Dou; Lu Chen; Junli Wang; Ning Jiang; Chunce Guo; Qingqing Yao; Chizao Wang; Lin Liu; Bin Yu; Binglian Zheng; Julia A Chekanova; Jinbiao Ma; Guodong Ren
Journal:  Proc Natl Acad Sci U S A       Date:  2018-06-25       Impact factor: 11.205

Review 2.  Plant Noncoding RNAs: Hidden Players in Development and Stress Responses.

Authors:  Yu Yu; Yuchan Zhang; Xuemei Chen; Yueqin Chen
Journal:  Annu Rev Cell Dev Biol       Date:  2019-08-12       Impact factor: 13.827

3.  Regulation of MicroRNAs.

Authors:  Kemal Ergin; Rahmi Çetinkaya
Journal:  Methods Mol Biol       Date:  2022

4.  Upregulated miRNA-622 inhibited cell proliferation, motility, and invasion via repressing Kirsten rat sarcoma in glioblastoma.

Authors:  Xinzhi Wang; Zhenxue Xin; Yinfu Xu; Jinbang Ma
Journal:  Tumour Biol       Date:  2015-11-23

Review 5.  MicroRNA (miRNA)-Mediated Pathogenetic Signaling in Alzheimer's Disease (AD).

Authors:  James M Hill; Walter J Lukiw
Journal:  Neurochem Res       Date:  2015-10-06       Impact factor: 3.996

6.  miR-22 inhibits the proliferation, motility, and invasion of human glioblastoma cells by directly targeting SIRT1.

Authors:  Hanchun Chen; Qiong Lu; Xifeng Fei; Likui Shen; Dongyi Jiang; Dongwei Dai
Journal:  Tumour Biol       Date:  2015-12-10

7.  The upregulation of miRNA-146a inhibited biological behaviors of ESCC through inhibition of IRS2.

Authors:  Haibo Liu; Guohua Ren; Liangming Zhu; Xiangyan Liu; Xiaopeng He
Journal:  Tumour Biol       Date:  2015-10-28

8.  Effects of miR-22 on viability, migration, invasion and apoptosis in retinoblastoma Y79 cells by targeting high-mobility group box 1.

Authors:  Min Liu; Shuo-Min Wang; Zheng-Xuan Jiang; Hennein Lauren; Li-Ming Tao
Journal:  Int J Ophthalmol       Date:  2018-10-18       Impact factor: 1.779

9.  Serum MicroRNA Transcriptomics and Acute Rejection or Recurrent Hepatitis C Virus in Human Liver Allograft Recipients: A Pilot Study.

Authors:  Thangamani Muthukumar; Kemal M Akat; Hua Yang; Joseph E Schwartz; Carol Li; Heejung Bang; Iddo Z Ben-Dov; John R Lee; David Ikle; Anthony J Demetris; Thomas Tuschl; Manikkam Suthanthiran
Journal:  Transplantation       Date:  2022-04-01       Impact factor: 4.939

Review 10.  MicroRNAs as monitoring markers for right-sided heart failure and congestive hepatopathy.

Authors:  Ruxandra Florentina Ionescu; Sanda Maria Cretoiu
Journal:  J Med Life       Date:  2021 Mar-Apr
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.