Literature DB >> 26336138

Hybrid Framework Using Multiple-Filters and an Embedded Approach for an Efficient Selection and Classification of Microarray Data.

Edmundo Bonilla-Huerta, Alberto Hernández-Montiel, Roberto-Morales Caporal, Marco Arjona López.   

Abstract

A hybrid framework composed of two stages for gene selection and classification of DNA microarray data is proposed. At the first stage, five traditional statistical methods are combined for preliminary gene selection (Multiple Fusion Filter). Then, different relevant gene subsets are selected by using an embedded Genetic Algorithm (GA), Tabu Search (TS), and Support Vector Machine (SVM). A gene subset, consisting of the most relevant genes, is obtained from this process, by analyzing the frequency of each gene in the different gene subsets. Finally, the most frequent genes are evaluated by the embedded approach to obtain a final relevant small gene subset with high performance. The proposed method is tested in four DNA microarray datasets. From simulation study, it is observed that the proposed approach works better than other methods reported in the literature.

Mesh:

Year:  2015        PMID: 26336138     DOI: 10.1109/TCBB.2015.2474384

Source DB:  PubMed          Journal:  IEEE/ACM Trans Comput Biol Bioinform        ISSN: 1545-5963            Impact factor:   3.710


  2 in total

1.  A hybrid feature selection model based on improved squirrel search algorithm and rank aggregation using fuzzy techniques for biomedical data classification.

Authors:  Gayathri Nagarajan; L D Dhinesh Babu
Journal:  Netw Model Anal Health Inform Bioinform       Date:  2021-06-02

2.  Classifying Incomplete Gene-Expression Data: Ensemble Learning with Non-Pre-Imputation Feature Filtering and Best-First Search Technique.

Authors:  Yuanting Yan; Tao Dai; Meili Yang; Xiuquan Du; Yiwen Zhang; Yanping Zhang
Journal:  Int J Mol Sci       Date:  2018-10-30       Impact factor: 5.923

  2 in total

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