Literature DB >> 26336105

Competing Lipid-Protein and Protein-Protein Interactions Determine Clustering and Gating Patterns in the Potassium Channel from Streptomyces lividans (KcsA).

M Luisa Molina1, A Marcela Giudici1, José A Poveda1, Gregorio Fernández-Ballester1, Estefanía Montoya1, M Lourdes Renart1, Asia M Fernández1, José A Encinar1, Gloria Riquelme2, Andrés Morales3, José M González-Ros4.   

Abstract

There is increasing evidence to support the notion that membrane proteins, instead of being isolated components floating in a fluid lipid environment, can be assembled into supramolecular complexes that take part in a variety of cooperative cellular functions. The interplay between lipid-protein and protein-protein interactions is expected to be a determinant factor in the assembly and dynamics of such membrane complexes. Here we report on a role of anionic phospholipids in determining the extent of clustering of KcsA, a model potassium channel. Assembly/disassembly of channel clusters occurs, at least partly, as a consequence of competing lipid-protein and protein-protein interactions at nonannular lipid binding sites on the channel surface and brings about profound changes in the gating properties of the channel. Our results suggest that these latter effects of anionic lipids are mediated via the Trp(67)-Glu(71)-Asp(80) inactivation triad within the channel structure and its bearing on the selectivity filter.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Ion channel inactivation; Supramolecular assembly of ion channels; coupled channel gating; gating; lipid-protein interaction; membrane protein clusters; membrane protein nonannular sites; molecular modeling; potassium channel; protein-protein interaction

Mesh:

Substances:

Year:  2015        PMID: 26336105      PMCID: PMC4646216          DOI: 10.1074/jbc.M115.669598

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  62 in total

1.  Exploring the open pore of the potassium channel from Streptomyces lividans.

Authors:  D Meuser; H Splitt; R Wagner; H Schrempf
Journal:  FEBS Lett       Date:  1999-12-03       Impact factor: 4.124

2.  Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution.

Authors:  Y Zhou; J H Morais-Cabral; A Kaufman; R MacKinnon
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

3.  SWISS-MODEL: An automated protein homology-modeling server.

Authors:  Torsten Schwede; Jürgen Kopp; Nicolas Guex; Manuel C Peitsch
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

4.  A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations.

Authors:  Yong Duan; Chun Wu; Shibasish Chowdhury; Mathew C Lee; Guoming Xiong; Wei Zhang; Rong Yang; Piotr Cieplak; Ray Luo; Taisung Lee; James Caldwell; Junmei Wang; Peter Kollman
Journal:  J Comput Chem       Date:  2003-12       Impact factor: 3.376

5.  Streptomyces lividans potassium channel KcsA is regulated by the potassium electrochemical gradient.

Authors:  E Zakharian; R N Reusch
Journal:  Biochem Biophys Res Commun       Date:  2004-04-02       Impact factor: 3.575

6.  KcsA: it's a potassium channel.

Authors:  M LeMasurier; L Heginbotham; C Miller
Journal:  J Gen Physiol       Date:  2001-09       Impact factor: 4.086

7.  Pore mutations affecting tetrameric assembly and functioning of the potassium channel KcsA from Streptomyces lividans.

Authors:  H Splitt; D Meuser; I Borovok; M Betzler; H Schrempf
Journal:  FEBS Lett       Date:  2000-04-21       Impact factor: 4.124

8.  Structural determinants of specific lipid binding to potassium channels.

Authors:  Markus Weingarth; Alexander Prokofyev; Elwin A W van der Cruijsen; Deepak Nand; Alexandre M J J Bonvin; Olaf Pongs; Marc Baldus
Journal:  J Am Chem Soc       Date:  2013-03-04       Impact factor: 15.419

9.  Molecular basis of ion selectivity, block, and rectification of the inward rectifier Kir3.1/Kir3.4 K(+) channel.

Authors:  Katherine M Dibb; Thierry Rose; Samy Y Makary; Thomas W Claydon; Decha Enkvetchakul; Robert Leach; Colin G Nichols; Mark R Boyett
Journal:  J Biol Chem       Date:  2003-09-22       Impact factor: 5.157

10.  Amphipathic antenna of an inward rectifier K+ channel responds to changes in the inner membrane leaflet.

Authors:  Masayuki Iwamoto; Shigetoshi Oiki
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-24       Impact factor: 11.205

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  10 in total

1.  Inactivation in the potassium channel KcsA.

Authors:  Yunyao Xu; Ann E McDermott
Journal:  J Struct Biol X       Date:  2019-06-12

2.  Emerging Diversity in Lipid-Protein Interactions.

Authors:  Valentina Corradi; Besian I Sejdiu; Haydee Mesa-Galloso; Haleh Abdizadeh; Sergei Yu Noskov; Siewert J Marrink; D Peter Tieleman
Journal:  Chem Rev       Date:  2019-02-13       Impact factor: 60.622

3.  An extracellular scaffolding complex confers unusual rectification upon an ionotropic acetylcholine receptor in C. elegans.

Authors:  Maëlle Jospin; Benjamin Bonneau; Viviane Lainé; Jean-Louis Bessereau
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-12       Impact factor: 12.779

Review 4.  Mechanisms and physiological implications of cooperative gating of clustered ion channels.

Authors:  Rose E Dixon; Manuel F Navedo; Marc D Binder; L Fernando Santana
Journal:  Physiol Rev       Date:  2021-12-20       Impact factor: 46.500

5.  NMR studies of lipid regulation of the K+ channel KcsA.

Authors:  Dongyu Zhang; Gary S Howarth; Lia A Parkin; Ann E McDermott
Journal:  Biochim Biophys Acta Biomembr       Date:  2020-10-13       Impact factor: 4.019

6.  The influence of membrane bilayer thickness on KcsA channel activity.

Authors:  Karen M Callahan; Benoit Mondou; Louis Sasseville; Jean-Louis Schwartz; Nazzareno D'Avanzo
Journal:  Channels (Austin)       Date:  2019-12       Impact factor: 2.581

Review 7.  Modulation of Function, Structure and Clustering of K+ Channels by Lipids: Lessons Learnt from KcsA.

Authors:  María Lourdes Renart; Ana Marcela Giudici; Clara Díaz-García; María Luisa Molina; Andrés Morales; José M González-Ros; José Antonio Poveda
Journal:  Int J Mol Sci       Date:  2020-04-07       Impact factor: 5.923

8.  High-Resolution Magic Angle Spinning NMR of KcsA in Liposomes: The Highly Mobile C-Terminus.

Authors:  Gary S Howarth; Ann E McDermott
Journal:  Biomolecules       Date:  2022-08-15

9.  Effects of selenium on myocardial apoptosis by modifying the activity of mitochondrial STAT3 and regulating potassium channel expression.

Authors:  Changjiang Zhang; Yinzhi Deng; Yuhua Lei; Jingbo Zhao; Wen Wei; Yuanhong Li
Journal:  Exp Ther Med       Date:  2017-07-04       Impact factor: 2.447

10.  Protein crowding and lipid complexity influence the nanoscale dynamic organization of ion channels in cell membranes.

Authors:  Anna L Duncan; Tyler Reddy; Heidi Koldsø; Jean Hélie; Philip W Fowler; Matthieu Chavent; Mark S P Sansom
Journal:  Sci Rep       Date:  2017-11-30       Impact factor: 4.996

  10 in total

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