Literature DB >> 26330622

Rapid and Efficient Plasmid Construction by Homologous Recombination in Yeast.

Jolanda van Leeuwen1, Brenda Andrews2, Charles Boone2, Guihong Tan1.   

Abstract

The cloning of DNA fragments is a fundamental aspect of molecular biology. Traditional DNA cloning techniques rely on the ligation of an insert and a linearized plasmid that have been digested with restriction enzymes and the subsequent introduction of the ligated DNA into Escherichia coli for propagation. However, this method is limited by the availability of restriction sites, which often becomes problematic when cloning multiple or large DNA fragments. Furthermore, using traditional methods to clone multiple DNA fragments requires experience and multiple laborious steps. In this protocol, we describe a simple and efficient cloning method that relies on homologous recombination in the yeast Saccharomyces cerevisiae to assemble multiple DNA fragments, with 30-bp homology regions between the fragments, into one sophisticated construct. This method can easily be extended to clone plasmids for other organisms, such as bacteria, plants, and mammalian cells.
© 2015 Cold Spring Harbor Laboratory Press.

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Year:  2015        PMID: 26330622     DOI: 10.1101/pdb.prot085100

Source DB:  PubMed          Journal:  Cold Spring Harb Protoc        ISSN: 1559-6095


  14 in total

1.  The epigenetic reader SntB regulates secondary metabolism, development and global histone modifications in Aspergillus flavus.

Authors:  Brandon T Pfannenstiel; Claudio Greco; Andrew T Sukowaty; Nancy P Keller
Journal:  Fungal Genet Biol       Date:  2018-08-18       Impact factor: 3.495

2.  Incorporating, Quantifying, and Leveraging Noncanonical Amino Acids in Yeast.

Authors:  Jessica T Stieglitz; James A Van Deventer
Journal:  Methods Mol Biol       Date:  2022

3.  Chemical genomics with pyrvinium identifies C1orf115 as a regulator of drug efflux.

Authors:  Sanna N Masud; Megha Chandrashekhar; Michael Aregger; Guihong Tan; Xiaoyu Zhang; Patricia Mero; David A Pirman; Olga Zaslaver; Gromoslaw A Smolen; Zhen-Yuan Lin; Cassandra J Wong; Charles Boone; Anne-Claude Gingras; J Rafael Montenegro-Burke; Jason Moffat
Journal:  Nat Chem Biol       Date:  2022-08-15       Impact factor: 16.174

4.  Selenate sensitivity of a laeA mutant is restored by overexpression of the bZIP protein MetR in Aspergillus fumigatus.

Authors:  Sachin Jain; Relebohile Sekonyela; Benjamin P Knox; Jonathan M Palmer; Anna Huttenlocher; Mehdi Kabbage; Nancy P Keller
Journal:  Fungal Genet Biol       Date:  2018-05-09       Impact factor: 3.495

5.  Heterologous Expression of the Carrot Hsp17.7 gene Increased Growth, Cell Viability, and Protein Solubility in Transformed Yeast (Saccharomyces cerevisiae) under Heat, Cold, Acid, and Osmotic Stress Conditions.

Authors:  Eunhye Ko; Minhye Kim; Yunho Park; Yeh-Jin Ahn
Journal:  Curr Microbiol       Date:  2017-06-01       Impact factor: 2.188

Review 6.  In vivo DNA assembly using common laboratory bacteria: A re-emerging tool to simplify molecular cloning.

Authors:  Jake F Watson; Javier García-Nafría
Journal:  J Biol Chem       Date:  2019-09-14       Impact factor: 5.157

7.  In vivo cloning of up to 16 kb plasmids in E. coli is as simple as PCR.

Authors:  Faqing Huang; Joseph Rankin Spangler; Allen Yang Huang
Journal:  PLoS One       Date:  2017-08-24       Impact factor: 3.240

8.  Revitalization of a Forward Genetic Screen Identifies Three New Regulators of Fungal Secondary Metabolism in the Genus Aspergillus.

Authors:  Brandon T Pfannenstiel; Xixi Zhao; Jennifer Wortman; Philipp Wiemann; Kurt Throckmorton; Joseph E Spraker; Alexandra A Soukup; Xingyu Luo; Daniel L Lindner; Fang Yun Lim; Benjamin P Knox; Brian Haas; Gregory J Fischer; Tsokyi Choera; Robert A E Butchko; Jin-Woo Bok; Katharyn J Affeldt; Nancy P Keller; Jonathan M Palmer
Journal:  mBio       Date:  2017-09-05       Impact factor: 7.867

9.  Production of (S)-2-aminobutyric acid and (S)-2-aminobutanol in Saccharomyces cerevisiae.

Authors:  Nora Weber; Anaëlle Hatsch; Ludivine Labagnere; Harald Heider
Journal:  Microb Cell Fact       Date:  2017-03-23       Impact factor: 5.328

10.  IVA cloning: A single-tube universal cloning system exploiting bacterial In Vivo Assembly.

Authors:  Javier García-Nafría; Jake F Watson; Ingo H Greger
Journal:  Sci Rep       Date:  2016-06-06       Impact factor: 4.379

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