Literature DB >> 26323295

Crystallographic studies of the structured core domain of Knr4 from Saccharomyces cerevisiae.

Sylviane Julien1, Patrick Tondl1, Fabien Durand2, Adilia Dagkessamanskaia2, Herman van Tilbeurgh3, Jean Marie François2, Lionel Mourey1, Didier Zerbib1, Hélène Martin-Yken2, Laurent Maveyraud1.   

Abstract

The potentially structured core domain of the intrinsically disordered protein Knr4 from Saccharomyces cerevisiae, comprising residues 80-340, was expressed in Escherichia coli and crystallized using the hanging-drop vapour-diffusion method. Selenomethionine-containing (SeMet) protein was also purified and crystallized. Crystals of both proteins belonged to space group P6522, with unit-cell parameters a = b = 112.44, c = 265.21 Å for the native protein and a = b = 112.49, c = 262.21 Å for the SeMet protein, and diffracted to 3.50 and 3.60 Å resolution, respectively. There are two molecules in the asymmetric unit related by a twofold axis. The anomalous signal of selenium was recorded and yielded an electron-density map of sufficient quality to allow the identification of secondary-structure elements.

Entities:  

Keywords:  Saccharomyces cerevisiae; cell-wall biogenesis regulation; hub proteins; intrinsically disordered proteins

Mesh:

Substances:

Year:  2015        PMID: 26323295      PMCID: PMC4555916          DOI: 10.1107/S2053230X15012522

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  21 in total

1.  Functional dissection of an intrinsically disordered protein: understanding the roles of different domains of Knr4 protein in protein-protein interactions.

Authors:  Adilia Dagkessamanskaia; Fabien Durand; Vladimir N Uversky; Matteo Binda; Frédéric Lopez; Karim El Azzouzi; Jean Marie Francois; Hélène Martin-Yken
Journal:  Protein Sci       Date:  2010-07       Impact factor: 6.725

2.  Knr4 N-terminal domain controls its localization and function during sexual differentiation and vegetative growth.

Authors:  Adilia Dagkessamanskaia; Karim El Azzouzi; Yo Kikuchi; Ton Timmers; Yoshikazu Ohya; Jean-Marie François; Hélène Martin-Yken
Journal:  Yeast       Date:  2010-08       Impact factor: 3.239

Review 3.  Flexible nets. The roles of intrinsic disorder in protein interaction networks.

Authors:  A Keith Dunker; Marc S Cortese; Pedro Romero; Lilia M Iakoucheva; Vladimir N Uversky
Journal:  FEBS J       Date:  2005-10       Impact factor: 5.542

4.  Interface of Candida albicans biofilm matrix-associated drug resistance and cell wall integrity regulation.

Authors:  Jeniel E Nett; Hiram Sanchez; Michael T Cain; Kelly M Ross; David R Andes
Journal:  Eukaryot Cell       Date:  2011-06-10

5.  Structure-function analysis of Knr4/Smi1, a newly member of intrinsically disordered proteins family, indispensable in the absence of a functional PKC1-SLT2 pathway in Saccharomyces cerevisiae.

Authors:  Fabien Durand; Adilia Dagkessamanskaia; Helene Martin-Yken; Marc Graille; Herman Van Tilbeurgh; Vladimir N Uversky; Jean M François
Journal:  Yeast       Date:  2008-08       Impact factor: 3.239

6.  Experimental phasing with SHELXC/D/E: combining chain tracing with density modification.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

7.  Integration, scaling, space-group assignment and post-refinement.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

8.  The interaction of Slt2 MAP kinase with Knr4 is necessary for signalling through the cell wall integrity pathway in Saccharomyces cerevisiae.

Authors:  Helene Martin-Yken; Adilia Dagkessamanskaia; Fadi Basmaji; Arnaud Lagorce; Jean Francois
Journal:  Mol Microbiol       Date:  2003-07       Impact factor: 3.501

9.  Saccharomyces Genome Database: the genomics resource of budding yeast.

Authors:  J Michael Cherry; Eurie L Hong; Craig Amundsen; Rama Balakrishnan; Gail Binkley; Esther T Chan; Karen R Christie; Maria C Costanzo; Selina S Dwight; Stacia R Engel; Dianna G Fisk; Jodi E Hirschman; Benjamin C Hitz; Kalpana Karra; Cynthia J Krieger; Stuart R Miyasato; Rob S Nash; Julie Park; Marek S Skrzypek; Matt Simison; Shuai Weng; Edith D Wong
Journal:  Nucleic Acids Res       Date:  2011-11-21       Impact factor: 16.971

Review 10.  A decade and a half of protein intrinsic disorder: biology still waits for physics.

Authors:  Vladimir N Uversky
Journal:  Protein Sci       Date:  2013-04-29       Impact factor: 6.725

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