Literature DB >> 26321163

Shift and adapt: the costs and benefits of karyotype variations.

Aleeza C Gerstein1, Judith Berman2.   

Abstract

Variation is the spice of life or, in the case of evolution, variation is the necessary material on which selection can act to enable adaptation. Karyotypic variation in ploidy (the number of homologous chromosome sets) and aneuploidy (imbalance in the number of chromosomes) are fundamentally different than other types of genomic variants. Karyotypic variation emerges through different molecular mechanisms than other mutational events, and unlike mutations that alter the genome at the base pair level, rapid reversion to the wild type chromosome number is often possible. Although karyotypic variation has long been noted and discussed by biologists, interest in the importance of karyotypic variants in evolutionary processes has spiked in recent years, and much remains to be discovered about how karyotypic variants are produced and subsequently selected.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 26321163      PMCID: PMC4577464          DOI: 10.1016/j.mib.2015.06.010

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  61 in total

1.  Widespread aneuploidy revealed by DNA microarray expression profiling.

Authors:  T R Hughes; C J Roberts; H Dai; A R Jones; M R Meyer; D Slade; J Burchard; S Dow; T R Ward; M J Kidd; S H Friend; M J Marton
Journal:  Nat Genet       Date:  2000-07       Impact factor: 38.330

Review 2.  New insights into the troubles of aneuploidy.

Authors:  Jake J Siegel; Angelika Amon
Journal:  Annu Rev Cell Dev Biol       Date:  2012-07-09       Impact factor: 13.827

3.  Cryptococcus neoformans overcomes stress of azole drugs by formation of disomy in specific multiple chromosomes.

Authors:  Edward Sionov; Hyeseung Lee; Yun C Chang; Kyung J Kwon-Chung
Journal:  PLoS Pathog       Date:  2010-04-01       Impact factor: 6.823

4.  Short-term exposure to fluconazole induces chromosome loss in Candida albicans: an approach to produce haploid cells.

Authors:  Fang-Mo Chang; Tsong-Yih Ou; Wei-Ning Cheng; Ming-Li Chou; Kai-Cheng Lee; Yi-Ping Chin; Chih-Peng Lin; Kai-Di Chang; Che-Tong Lin; Ching-Hua Su
Journal:  Fungal Genet Biol       Date:  2014-07-17       Impact factor: 3.495

5.  Aneuploidy underlies a multicellular phenotypic switch.

Authors:  Zhihao Tan; Michelle Hays; Gareth A Cromie; Eric W Jeffery; Adrian C Scott; Vida Ahyong; Amy Sirr; Alexander Skupin; Aimée M Dudley
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-28       Impact factor: 11.205

6.  Genetic and phenotypic intra-species variation in Candida albicans.

Authors:  Matthew P Hirakawa; Diego A Martinez; Sharadha Sakthikumar; Matthew Z Anderson; Aaron Berlin; Sharvari Gujja; Qiandong Zeng; Ethan Zisson; Joshua M Wang; Joshua M Greenberg; Judith Berman; Richard J Bennett; Christina A Cuomo
Journal:  Genome Res       Date:  2014-12-11       Impact factor: 9.043

7.  Aneuploid proliferation defects in yeast are not driven by copy number changes of a few dosage-sensitive genes.

Authors:  Megan E Bonney; Hisao Moriya; Angelika Amon
Journal:  Genes Dev       Date:  2015-05-01       Impact factor: 11.361

8.  The 'obligate diploid' Candida albicans forms mating-competent haploids.

Authors:  Meleah A Hickman; Guisheng Zeng; Anja Forche; Matthew P Hirakawa; Darren Abbey; Benjamin D Harrison; Yan-Ming Wang; Ching-hua Su; Richard J Bennett; Yue Wang; Judith Berman
Journal:  Nature       Date:  2013-01-30       Impact factor: 49.962

9.  Acquisition of aneuploidy provides increased fitness during the evolution of antifungal drug resistance.

Authors:  Anna M Selmecki; Keely Dulmage; Leah E Cowen; James B Anderson; Judith Berman
Journal:  PLoS Genet       Date:  2009-10-30       Impact factor: 5.917

10.  A tetraploid intermediate precedes aneuploid formation in yeasts exposed to fluconazole.

Authors:  Benjamin D Harrison; Jordan Hashemi; Maayan Bibi; Rebecca Pulver; Danny Bavli; Yaakov Nahmias; Melanie Wellington; Guillermo Sapiro; Judith Berman
Journal:  PLoS Biol       Date:  2014-03-18       Impact factor: 8.029

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  19 in total

Review 1.  Molecular and cellular bases of adaptation to a changing environment in microorganisms.

Authors:  Clara Bleuven; Christian R Landry
Journal:  Proc Biol Sci       Date:  2016-10-26       Impact factor: 5.349

Review 2.  Condition-dependent sex: who does it, when and why?

Authors:  Yoav Ram; Lilach Hadany
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-10-19       Impact factor: 6.237

3.  Haplotyping a Non-meiotic Diploid Fungal Pathogen Using Induced Aneuploidies and SNP/CGH Microarray Analysis.

Authors:  Judith Berman; Anja Forche
Journal:  Methods Mol Biol       Date:  2017

4.  Fungal evolution: cellular, genomic and metabolic complexity.

Authors:  Miguel A Naranjo-Ortiz; Toni Gabaldón
Journal:  Biol Rev Camb Philos Soc       Date:  2020-04-17

5.  Editorial overview: host-microbe interactions: fungi: heterogeneity in fungal cells, populations, and communities.

Authors:  Deborah A Hogan; Amy S Gladfelter
Journal:  Curr Opin Microbiol       Date:  2015-07-20       Impact factor: 7.934

6.  Phenotypic Consequences of a Spontaneous Loss of Heterozygosity in a Common Laboratory Strain of Candida albicans.

Authors:  Toni Ciudad; Meleah Hickman; Alberto Bellido; Judith Berman; Germán Larriba
Journal:  Genetics       Date:  2016-05-20       Impact factor: 4.562

7.  Recombination Alters the Dynamics of Adaptation on Standing Variation in Laboratory Yeast Populations.

Authors:  Katya Kosheleva; Michael M Desai
Journal:  Mol Biol Evol       Date:  2018-01-01       Impact factor: 16.240

8.  Incompatibilities in Mismatch Repair Genes MLH1-PMS1 Contribute to a Wide Range of Mutation Rates in Human Isolates of Baker's Yeast.

Authors:  Vandana Raghavan; Duyen T Bui; Najla Al-Sweel; Anne Friedrich; Joseph Schacherer; Charles F Aquadro; Eric Alani
Journal:  Genetics       Date:  2018-10-22       Impact factor: 4.562

9.  Powerful decomposition of complex traits in a diploid model.

Authors:  Johan Hallin; Kaspar Märtens; Alexander I Young; Martin Zackrisson; Francisco Salinas; Leopold Parts; Jonas Warringer; Gianni Liti
Journal:  Nat Commun       Date:  2016-11-02       Impact factor: 14.919

10.  A chromosome 4 trisomy contributes to increased fluconazole resistance in a clinical isolate of Candida albicans.

Authors:  Matthew Z Anderson; Amrita Saha; Abid Haseeb; Richard J Bennett
Journal:  Microbiology       Date:  2017-06-22       Impact factor: 2.777

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