Literature DB >> 26318074

Advancing metabolic engineering through systems biology of industrial microorganisms.

Zongjie Dai1, Jens Nielsen2.   

Abstract

Development of sustainable processes to produce bio-based compounds is necessary due to the severe environmental problems caused by the use of fossil resources. Metabolic engineering can facilitate the development of highly efficient cell factories to produce these compounds from renewable resources. The objective of systems biology is to gain a comprehensive and quantitative understanding of living cells and can hereby enhance our ability to characterize and predict cellular behavior. Systems biology of industrial microorganisms is therefore valuable for metabolic engineering. Here we review the application of systems biology tools for the identification of metabolic engineering targets which may lead to reduced development time for efficient cell factories. Finally, we present some perspectives of systems biology for advancing metabolic engineering further.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2015        PMID: 26318074     DOI: 10.1016/j.copbio.2015.08.006

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  20 in total

1.  Engineering of primary metabolic pathways for titer improvement of milbemycins in Streptomyces bingchenggensis.

Authors:  Yuqing Liu; Haiyan Wang; Shanshan Li; Yanyan Zhang; Xu Cheng; Wensheng Xiang; Xiangjing Wang
Journal:  Appl Microbiol Biotechnol       Date:  2021-02-10       Impact factor: 4.813

Review 2.  Microbial engineering to produce fatty alcohols and alkanes.

Authors:  Ashima Sharma; Syed Shams Yazdani
Journal:  J Ind Microbiol Biotechnol       Date:  2021-04-30       Impact factor: 4.258

Review 3.  Algal Cell Factories: Approaches, Applications, and Potentials.

Authors:  Weiqi Fu; Amphun Chaiboonchoe; Basel Khraiwesh; David R Nelson; Dina Al-Khairy; Alexandra Mystikou; Amnah Alzahmi; Kourosh Salehi-Ashtiani
Journal:  Mar Drugs       Date:  2016-12-13       Impact factor: 5.118

4.  A novel programmable lysozyme-based lysis system in Pseudomonas putida for biopolymer production.

Authors:  José Manuel Borrero-de Acuña; Cristian Hidalgo-Dumont; Nicolás Pacheco; Alex Cabrera; Ignacio Poblete-Castro
Journal:  Sci Rep       Date:  2017-06-29       Impact factor: 4.379

5.  IMGMD: A platform for the integration and standardisation of In silico Microbial Genome-scale Metabolic Models.

Authors:  Chao Ye; Nan Xu; Chuan Dong; Yuannong Ye; Xuan Zou; Xiulai Chen; Fengbiao Guo; Liming Liu
Journal:  Sci Rep       Date:  2017-04-07       Impact factor: 4.379

Review 6.  Challenges and Advances for Genetic Engineering of Non-model Bacteria and Uses in Consolidated Bioprocessing.

Authors:  Qiang Yan; Stephen S Fong
Journal:  Front Microbiol       Date:  2017-10-24       Impact factor: 5.640

7.  In-situ muconic acid extraction reveals sugar consumption bottleneck in a xylose-utilizing Saccharomyces cerevisiae strain.

Authors:  Thomas Nicolaï; Quinten Deparis; María R Foulquié-Moreno; Johan M Thevelein
Journal:  Microb Cell Fact       Date:  2021-06-07       Impact factor: 5.328

Review 8.  Genome-scale modeling of yeast: chronology, applications and critical perspectives.

Authors:  Helder Lopes; Isabel Rocha
Journal:  FEMS Yeast Res       Date:  2017-08-01       Impact factor: 2.796

Review 9.  Biobased production of alkanes and alkenes through metabolic engineering of microorganisms.

Authors:  Min-Kyoung Kang; Jens Nielsen
Journal:  J Ind Microbiol Biotechnol       Date:  2016-08-26       Impact factor: 3.346

10.  Metabolic Engineering of the Shikimate Pathway for Production of Aromatics and Derived Compounds-Present and Future Strain Construction Strategies.

Authors:  Nils J H Averesch; Jens O Krömer
Journal:  Front Bioeng Biotechnol       Date:  2018-03-26
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