Literature DB >> 26317128

RASMOL AB - new functionalities in the program for structure analysis.

Mateusz Pikora1, Artur Gieldon2.   

Abstract

For many years RasMol was one of the most used programs for molecular visualization. It was an excellent tool due to its simplicity and its low demand of computer power. Today it is replaced by OpenGL programs, which have excellent graphics that new computers can additionally handle. Molecular graphics is one of the best tools for the analysis of biomolecular data. With high efficiency and a low demand of computer power, RasMol can still be used as a quick and handy tool used for the analysis of biomolecular structures with good results. In this paper, we describe modifications to the RasMol program, as implemented on the base of RasMol AB 2. We introduced several new functions, namely: the identification of histidine isomers, and advanced structural selection and macro capabilities (as implemented in the point-click menu), which result in an increase in the speed and accuracy of structural analyses. The program can be downloaded from the project page: http://etoh.chem.univ.gda.pl/rasmol/.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26317128     DOI: 10.18388/abp.2015_972

Source DB:  PubMed          Journal:  Acta Biochim Pol        ISSN: 0001-527X            Impact factor:   2.149


  6 in total

1.  Peptidomimetics Based on C-Terminus of Blm10 Stimulate Human 20S Proteasome Activity and Promote Degradation of Proteins.

Authors:  Katarzyna Cekała; Karolina Trepczyk; Daria Sowik; Przemysław Karpowicz; Artur Giełdoń; Julia Witkowska; Małgorzata Giżyńska; Elżbieta Jankowska; Ewa Wieczerzak
Journal:  Biomolecules       Date:  2022-06-02

2.  Elucidating the Mechanism of Action of the Attributed Immunomodulatory Role of Eltrombopag in Primary Immune Thrombocytopenia: An In Silico Approach.

Authors:  Maria L Lozano; Cristina Segú-Vergés; Mireia Coma; María T Álvarez-Roman; José R González-Porras; Laura Gutiérrez; David Valcárcel; Nora Butta
Journal:  Int J Mol Sci       Date:  2021-06-27       Impact factor: 5.923

3.  Crystal structure of a low molecular weight activator Blm-pep with yeast 20S proteasome - insights into the enzyme activation mechanism.

Authors:  Julia Witkowska; Małgorzata Giżyńska; Przemysław Grudnik; Przemysław Golik; Przemysław Karpowicz; Artur Giełdoń; Grzegorz Dubin; Elżbieta Jankowska
Journal:  Sci Rep       Date:  2017-07-21       Impact factor: 4.379

4.  Processing and Maturation of Cathepsin C Zymogen: A Biochemical and Molecular Modeling Analysis.

Authors:  Anne-Sophie Lamort; Yveline Hamon; Cezary Czaplewski; Artur Gieldon; Seda Seren; Laurent Coquet; Fabien Lecaille; Adam Lesner; Gilles Lalmanach; Francis Gauthier; Dieter Jenne; Brice Korkmaz
Journal:  Int J Mol Sci       Date:  2019-09-25       Impact factor: 5.923

5.  Theoretical Investigation of the Coronavirus SARS-CoV-2 (COVID-19) Infection Mechanism and Selectivity.

Authors:  Iga Biskupek; Adam Sieradzan; Cezary Czaplewski; Adam Liwo; Adam Lesner; Artur Giełdoń
Journal:  Molecules       Date:  2022-03-24       Impact factor: 4.411

6.  Alanine scan of sialorphin and its hybrids with opiorphin: synthesis, molecular modelling and effect on enkephalins degradation.

Authors:  Małgorzata Sobocińska; Artur Giełdoń; Jakub Fichna; Elżbieta Kamysz
Journal:  Amino Acids       Date:  2018-05-12       Impact factor: 3.520

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.