Literature DB >> 26303899

Complete genome sequence analysis of enterovirus 71 isolated from children with hand, foot, and mouth disease in Thailand, 2012-2014.

John Mauleekoonphairoj1, Sompong Vongpunsawad1, Jiratchaya Puenpa1, Sumeth Korkong1, Yong Poovorawan2.   

Abstract

The complete genomic sequences of 14 enterovirus 71 (EV71) strains isolated from children with hand, foot, and mouth disease in Thailand from 2012 to 2014 were determined and compared to enterovirus group A prototypes. Phylogenetic analysis revealed that 13 strains resembled the B5 subgroup, while one strain from a fatal case designated THA_1219 belonged to the C4 subgroup. Similarity plot and bootscan analyses suggested that THA_1219 underwent recombination in the P2 and P3 regions. Full-genome data from this work will contribute to the study of evolution dynamics of EV71.

Entities:  

Keywords:  Enterovirus 71; Prevalence; Recombinants; Southeast Asia; Thailand

Mesh：

Substances：

Year:  2015        PMID： 26303899     DOI： 10.1007/s11262-015-1239-0

Source DB:  PubMed          Journal:  Virus Genes        ISSN： 0920-8569            Impact factor:   2.332


  24 in total

1.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

Review 2.  Virology, epidemiology, pathogenesis, and control of enterovirus 71.

Authors:  Tom Solomon; Penny Lewthwaite; David Perera; Mary Jane Cardosa; Peter McMinn; Mong How Ooi
Journal:  Lancet Infect Dis       Date:  2010-10-18       Impact factor: 25.071

3.  Complete genome analysis of coxsackievirus A2, A4, A5, and A10 strains isolated from hand, foot, and mouth disease patients in China revealing frequent recombination of human enterovirus A.

Authors:  Y F Hu; Fan Yang; J Du; J Dong; T Zhang; Z Q Wu; Y Xue; Qi Jin
Journal:  J Clin Microbiol       Date:  2011-05-04       Impact factor: 5.948

4.  Molecular characterization and complete genome analysis of human enterovirus 71 and coxsackievirus A16 from children with hand, foot and mouth disease in Thailand during 2008-2011.

Authors:  Jiratchaya Puenpa; Apiradee Theamboonlers; Sumeth Korkong; Piyada Linsuwanon; Chittima Thongmee; Susheera Chatproedprai; Yong Poovorawan
Journal:  Arch Virol       Date:  2011-09-07       Impact factor: 2.574

5.  Analysis of recombination and natural selection in human enterovirus 71.

Authors:  Xiaoming Chen; Qian Zhang; Jinghua Li; Wei Cao; Jin-Xia Zhang; Lei Zhang; Weilu Zhang; Zhong-Jun Shao; Yongping Yan
Journal:  Virology       Date:  2010-01-12       Impact factor: 3.616

6.  The association of recombination events in the founding and emergence of subgenogroup evolutionary lineages of human enterovirus 71.

Authors:  E C McWilliam Leitch; M Cabrerizo; J Cardosa; H Harvala; O E Ivanova; S Koike; A C M Kroes; A Lukashev; D Perera; M Roivainen; P Susi; G Trallero; D J Evans; P Simmonds
Journal:  J Virol       Date:  2011-12-28       Impact factor: 5.103

7.  Recombinant human enterovirus 71 in hand, foot and mouth disease patients.

Authors:  Yoke-Fun Chan; Sazaly AbuBaker
Journal:  Emerg Infect Dis       Date:  2004-08       Impact factor: 6.883

8.  Epidemic hand, foot and mouth disease caused by human enterovirus 71, Singapore.

Authors:  Kwai Peng Chan; Kee Tai Goh; Chia Yin Chong; Eng Swee Teo; Gilbert Lau; Ai Ee Ling
Journal:  Emerg Infect Dis       Date:  2003-01       Impact factor: 6.883

9.  Epidemiologic and virologic investigation of hand, foot, and mouth disease, southern Vietnam, 2005.

Authors:  Phan Van Tu; Nguyen Thi Thanh Thao; David Perera; Khanh Huu Truong; Nguyen Thi Kim Tien; Tang Chi Thuong; Ooi Mong How; Mary Jane Cardosa; Peter Charles McMinn
Journal:  Emerg Infect Dis       Date:  2007-11       Impact factor: 6.883

10.  Enterovirus genotypes causing hand foot and mouth disease in Shanghai, China: a molecular epidemiological analysis.

Authors:  Menghua Xu; Liyun Su; Lingfeng Cao; Huaqing Zhong; Niuniu Dong; Jin Xu
Journal:  BMC Infect Dis       Date:  2013-10-22       Impact factor: 3.090
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  6 in total

1.  Evolution and Spatiotemporal Dynamics of Enterovirus A71 Subgenogroups in Vietnam.

Authors:  Nguyen Thi Thanh Thao; Celeste Donato; Vu Thi Huyen Trang; Nguyen Trung Kien; Ph M Mai Thuy Trang; Tran Quoc Khanh; Dang Thi Nguyet; October M Sessions; Hoang Quoc Cuong; Phan Trong Lan; Vu Thi Que Huong; H Rogier van Doorn; Dhanasekaran Vijaykrishna
Journal:  J Infect Dis       Date:  2017-12-12       Impact factor: 5.226

2.  Hand, Foot, and Mouth Disease in Hunan Province, China, 2009-2014: Epidemiology and Death Risk Factors.

Authors:  Kai-Wei Luo; Li-Dong Gao; Shi-Xiong Hu; Hong Zhang; Zhi-Hong Deng; Wei Huang; Qian-Lai Sun; Fan Zhang; Si-Yu Zhang; Yu Chen
Journal:  PLoS One       Date:  2016-11-29       Impact factor: 3.240

3.  Enterovirus A71 Infection, Thailand, 2017.

Authors:  Jiratchaya Puenpa; Chompoonut Auphimai; Sumeth Korkong; Sompong Vongpunsawad; Yong Poovorawan
Journal:  Emerg Infect Dis       Date:  2018-07       Impact factor: 6.883

4.  Association between platelet count and the risk and progression of hand, foot, and mouth disease among children.

Authors:  Li Miao; Yongjuan Liu; Peiliang Luo; Song Mao; Jiansheng Liu; Siguang Lu
Journal:  Clinics (Sao Paulo)       Date:  2020-05-15       Impact factor: 2.365

5.  Molecular epidemiology of human enterovirus 71 at the origin of an epidemic of fatal hand, foot and mouth disease cases in Cambodia.

Authors:  Veasna Duong; Channa Mey; Marc Eloit; Huachen Zhu; Lucie Danet; Zhong Huang; Gang Zou; Arnaud Tarantola; Justine Cheval; Philippe Perot; Denis Laurent; Beat Richner; Santy Ky; Sothy Heng; Sok Touch; Ly Sovann; Rogier van Doorn; Thanh Tan Tran; Jeremy J Farrar; David E Wentworth; Suman R Das; Timothy B Stockwell; Jean-Claude Manuguerra; Francis Delpeyroux; Yi Guan; Ralf Altmeyer; Philippe Buchy
Journal:  Emerg Microbes Infect       Date:  2016-09-21       Impact factor: 7.163

Review 6.  The History of Enterovirus A71 Outbreaks and Molecular Epidemiology in the Asia-Pacific Region.

Authors:  Jiratchaya Puenpa; Nasamon Wanlapakorn; Sompong Vongpunsawad; Yong Poovorawan
Journal:  J Biomed Sci       Date:  2019-10-18       Impact factor: 8.410
  6 in total

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