Literature DB >> 26298124

Dynamics of gradient formation by intracellular shuttling.

Alexander M Berezhkovskii1, Stanislav Y Shvartsman2.   

Abstract

A number of important cellular functions rely on the formation of intracellular protein concentration gradients. Experimental studies discovered a number of mechanisms for the formation of such gradients. One of the mechanisms relies on the intracellular shuttling of a protein that interconverts between the two states with different diffusivities, under the action of two enzymes, one of which is localized to the plasma membrane, whereas the second is uniformly distributed in the cytoplasm. Recent work reported an analytical solution for the steady state gradient in this mechanism, obtained in the framework of a one-dimensional reaction-diffusion model. Here, we study the dynamics in this model and derive analytical expressions for the Laplace transforms of the time-dependent concentration profiles in terms of elementary transcendental functions. Inverting these transforms numerically, one can obtain time-dependent concentration profiles of the two forms of the protein.

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Year:  2015        PMID: 26298124      PMCID: PMC5562396          DOI: 10.1063/1.4928858

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  6 in total

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2.  Model for Protein Concentration Gradients in the Cytoplasm.

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3.  Regulation of the MEX-5 gradient by a spatially segregated kinase/phosphatase cycle.

Authors:  Erik E Griffin; David J Odde; Geraldine Seydoux
Journal:  Cell       Date:  2011-09-16       Impact factor: 41.582

4.  Nuclear trapping shapes the terminal gradient in the Drosophila embryo.

Authors:  Mathieu Coppey; Alistair N Boettiger; Alexander M Berezhkovskii; Stanislav Y Shvartsman
Journal:  Curr Biol       Date:  2008-06-24       Impact factor: 10.834

Review 5.  Spatially distributed cell signalling.

Authors:  Boris N Kholodenko
Journal:  FEBS Lett       Date:  2009-12-17       Impact factor: 4.124

6.  The cell-end factor pom1p inhibits mid1p in specification of the cell division plane in fission yeast.

Authors:  Neal N Padte; Sophie G Martin; Martin Howard; Fred Chang
Journal:  Curr Biol       Date:  2006-11-30       Impact factor: 10.834

  6 in total

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