Literature DB >> 26297493

Kordia zhangzhouensis sp. nov., isolated from surface freshwater.

Juan Du1, Yang Liu1, Qiliang Lai1, Chunming Dong1, Yanrong Xie1, Zongze Shao1.   

Abstract

An aerobic, Gram-stain-negative, rod-shaped and non-motile bacterium, JS14SB-1T, was isolated from the surface freshwater of the Jiulong River, PR China. Strain JS14SB-1T grew at 15–38 °C (optimum, 28–35 °C), at pH 6.0–9.0 (optimum pH 7.0) and in the presence of 1.0–7.0 % (w/v) NaCl [optimum 3.0–5.0 % (w/v)]. Phylogenetic analysis, based on 16S rRNA gene sequences, indicated that strain JS14SB-1T was affiliated to the genus Kordia, sharing low similarities (95.1–97.1 %) to all type strains of species of this genus. The digital DNA–DNA hybridization (DDH) value between strain JS14SB-1T and the closely related strain Kordia jejudonensis SSK3-3T was 20.70 ± 2.33 % and far below the 70 % DDH value taken as the gold standard for delineation of bacterial species. The major fatty acids were identified as iso-C15 : 0 and iso-C17 : 0 3-OH. The polar lipids were phosphatidylethanolamine, glycolipid, aminolipid, several unidentified phospholipids and lipids. The predominant menaquinone was MK-6. The G+C content of the genomic DNA was 33.8 mol%. Based on the phenotypic, phylogenetic and chemotaxonomic distinctiveness, strain JS14SB-1T is considered to represent a novel species of the genus Kordia, for which the name Kordia zhangzhouensis sp. nov. is proposed; the type strain is JS14SB-1T ( = MCCC 1A00726T = KCTC 42140T).

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26297493     DOI: 10.1099/ijsem.0.000424

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Exploring Microdiversity in Novel Kordia sp. (Bacteroidetes) with Proteorhodopsin from the Tropical Indian Ocean via Single Amplified Genomes.

Authors:  Marta Royo-Llonch; Isabel Ferrera; Francisco M Cornejo-Castillo; Pablo Sánchez; Guillem Salazar; Ramunas Stepanauskas; José M González; Michael E Sieracki; Sabrina Speich; Lars Stemmann; Carlos Pedrós-Alió; Silvia G Acinas
Journal:  Front Microbiol       Date:  2017-07-25       Impact factor: 5.640

2.  Genome Sequence of Kordia sp. Strain SMS9 Identified in a Non-Axenic Culture of the Diatom Skeletonema marinoi.

Authors:  Matthew I M Pinder; Oskar N Johansson; Alvar Almstedt; Olga Kourtchenko; Adrian K Clarke; Anna Godhe; Mats Töpel
Journal:  J Genomics       Date:  2019-05-09

3.  Genome characteristics of Kordia antarctica IMCC3317T and comparative genome analysis of the genus Kordia.

Authors:  Yeonjung Lim; Ilnam Kang; Jang-Cheon Cho
Journal:  Sci Rep       Date:  2020-09-07       Impact factor: 4.379

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.