Literature DB >> 26296342

Sphingomonas vulcanisoli sp. nov., isolated from soil of a lava forest.

Keun Chul Lee1, Kwang Kyu Kim1, Jong-Shik Kim2, Dae-Shin Kim3, Suk-Hyung Ko3, Seung-Hoon Yang3, Song-Gun Kim1, Jung-Sook Lee4,1.   

Abstract

A Gram-stain-negative, non-motile, yellow-pigmented and rod-shaped bacterial strain, designated SN6-13T, was isolated from soil of the Gotjawal, lava forest, located in Jeju, Republic of Korea. Cells of strain SN6-13T were oxidase- and catalase-positive. The isolate contained Q-10 as the predominant isoprenoid quinone, summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c) and C16 : 0 as the major fatty acids, sym-homospermidine as the major polyamine and diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, sphingoglycolipid, ninhydrinphosphatidylglycerol and two unidentified aminophospholipids as the polar lipids. The DNA G+C content was 64.6 mol%. In phylogenetic analyses based on 16S rRNA gene sequencing, strain SN6-13T was most closely related to Sphingomonas laterariae LNB2T (95.4 % sequence similarity) and formed a separate lineage in the genus Sphingomonas. Based on phenotypic, chemotaxonomic and phylogenetic characteristics, it is concluded that strain SN6-13T represents a novel species of the genus Sphingomonas, for which the name Sphingomonas vulcanisoli sp. nov. is proposed. The type strain is SN6-13T ( = KCTC 42454T = CECT 8804T).

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Year:  2015        PMID: 26296342     DOI: 10.1099/ijsem.0.000414

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  2 in total

1.  The Response of a 16S Ribosomal RNA Gene Fragment Amplified Community to Lead, Zinc, and Copper Pollution in a Shanghai Field Trial.

Authors:  Shumeng Kou; Gilles Vincent; Emmanuel Gonzalez; Frederic E Pitre; Michel Labrecque; Nicholas J B Brereton
Journal:  Front Microbiol       Date:  2018-03-01       Impact factor: 5.640

2.  Microbial community structure and functional potential of lava-formed Gotjawal soils in Jeju, Korea.

Authors:  Jong-Shik Kim; Dae-Shin Kim; Keun Chul Lee; Jung-Sook Lee; Gary M King; Sanghoon Kang
Journal:  PLoS One       Date:  2018-10-12       Impact factor: 3.240

  2 in total

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