Literature DB >> 26295883

Concerted and Sequential Proton Transfer Mechanisms in Water-Separated Acid-Base Encounter Pairs.

Vibin Thomas1, Ugo Rivard1, Patrick Maurer1, Andrew Bruhács2, Bradley J Siwick2, Radu Iftimie1.   

Abstract

The proton transfer mechanisms involved inside aqueous, solvent-separated encounter complexes between phenol and carboxyl moieties are studied using ab initio molecular dynamics and computational time-resolved vibrational spectroscopy. This model framework can be viewed as a ground-state analog of the excited-state proton transfer reactions that have been actively investigated using ultrafast spectroscopy. Three qualitatively distinct proton transfer pathways are observed in the simulations. These can be described as direct concerted, direct sequential, and through bulk transfers. The primary difference between the sequential and concerted mechanism is the involvement of a reaction intermediate in which the proton fluctuates for several picoseconds through the hydrogen bonds connecting donor and acceptor but resides primarily on an intervening water molecule in the encounter complex. These results contribute to our molecular level understanding of the diverse processes involved in proton transfer within water-separated encounter complexes.

Entities:  

Keywords:  ab initio molecular dynamics; acid−base reactions; proton transfer; sequential versus concerted mechanism; time-resolved vibration spectroscopy

Year:  2012        PMID: 26295883     DOI: 10.1021/jz3012639

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  3 in total

1.  Ultrafast Proton Transport between a Hydroxy Acid and a Nitrogen Base along Solvent Bridges Governed by the Hydroxide/Methoxide Transfer Mechanism.

Authors:  Maria Ekimova; Felix Hoffmann; Gül Bekçioğlu-Neff; Aidan Rafferty; Oleg Kornilov; Erik T J Nibbering; Daniel Sebastiani
Journal:  J Am Chem Soc       Date:  2019-09-06       Impact factor: 15.419

2.  Multiscale Reactive Molecular Dynamics for Absolute pKa Predictions and Amino Acid Deprotonation.

Authors:  J Gard Nelson; Yuxing Peng; Daniel W Silverstein; Jessica M J Swanson
Journal:  J Chem Theory Comput       Date:  2014-05-06       Impact factor: 6.006

3.  Synergetic Effect of Brønsted/Lewis Acid Sites and Water on the Catalytic Dehydration of Glucose to 5-Hydroxymethylfurfural by Heteropolyacid-Based Ionic Hybrids.

Authors:  Pingping Zhao; Hongyou Cui; Yunyun Zhang; Yuan Zhang; Yong Wang; Yali Zhang; Yujiao Xie; Weiming Yi
Journal:  ChemistryOpen       Date:  2018-10-12       Impact factor: 2.911

  3 in total

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