Literature DB >> 26294275

The Potential of High-throughput Metagenomic Sequencing of Aquatic Bacterial Communities to Estimate the Postmortem Submersion Interval.

Mark Eric Benbow1, Jennifer L Pechal1, Jennifer M Lang2, Racheal Erb3, John R Wallace3.   

Abstract

Human remains can be discovered in freshwater or marine ecosystems, circumstances where insects and other invertebrates have infrequently been used for understanding the time of postmortem submersion. In this study, the identification and succession of epinecrotic bacterial communities on vertebrate remains were described during decomposition in a temperate headwater stream during two seasons (summer and winter). Bacterial communities were characterized with 454 pyrosequencing and analyzed at phyletic and generic taxonomic resolutions. There was a significant increase in genera richness over decomposition during both seasons. Additionally, multivariate statistical modeling revealed significant differences in bacterial communities between seasons at both taxonomic resolutions and siginificant genera differences among sampling days within each season, suggesting a succession of these communities. These data are the first to describe aquatic bacterial succession using high-throughput metagenomic sequencing on vertebrate remains submerged in a freshwater habitat, and provide initial evidence for their potential use in forensic investigations.
© 2015 American Academy of Forensic Sciences.

Entities:  

Keywords:  aquatic microbial communities; epinecrotic communities; forensic science; high-throughput metagenomic sequencing; necrobiome; postmortem submersion interval; pyrosequencing

Mesh:

Substances:

Year:  2015        PMID: 26294275     DOI: 10.1111/1556-4029.12859

Source DB:  PubMed          Journal:  J Forensic Sci        ISSN: 0022-1198            Impact factor:   1.832


  11 in total

1.  Potential use of high-throughput sequencing of bacterial communities for postmortem submersion interval estimation.

Authors:  Jing He; Juanjuan Guo; Xiaoliang Fu; Jifeng Cai
Journal:  Braz J Microbiol       Date:  2019-07-30       Impact factor: 2.476

Review 2.  An interdisciplinary review of the thanatomicrobiome in human decomposition.

Authors:  Gulnaz T Javan; Sheree J Finley; Sari Tuomisto; Ashley Hall; M Eric Benbow; DeEtta Mills
Journal:  Forensic Sci Med Pathol       Date:  2018-12-05       Impact factor: 2.007

3.  The correlation between the Aquatic Decomposition Score (ADS) and the post-mortem submersion interval measured in Accumulated Degree Days (ADD) in bodies recovered from fresh water.

Authors:  Guido Reijnen; H Tamara Gelderman; Bernice F L Oude Grotebevelsborg; Udo J L Reijnders; Wilma L J M Duijst
Journal:  Forensic Sci Med Pathol       Date:  2018-05-24       Impact factor: 2.007

4.  Microbial Signatures of Cadaver Gravesoil During Decomposition.

Authors:  Sheree J Finley; Jennifer L Pechal; M Eric Benbow; B K Robertson; Gulnaz T Javan
Journal:  Microb Ecol       Date:  2016-01-09       Impact factor: 4.552

5.  Potential use of molecular and structural characterization of the gut bacterial community for postmortem interval estimation in Sprague Dawley rats.

Authors:  Huan Li; Siruo Zhang; Ruina Liu; Lu Yuan; Di Wu; E Yang; Han Yang; Shakir Ullah; Hafiz Muhammad Ishaq; Hailong Liu; Zhenyuan Wang; Jiru Xu
Journal:  Sci Rep       Date:  2021-01-08       Impact factor: 4.379

6.  Bacterial Succession in Microbial Biofilm as a Potential Indicator for Postmortem Submersion Interval Estimation.

Authors:  Finkelbergs Dmitrijs; Juanjuan Guo; Yecao Huang; Yafei Liu; Xinyue Fang; Kankan Jiang; Lagabaiyila Zha; Jifeng Cai; Xiaoliang Fu
Journal:  Front Microbiol       Date:  2022-07-22       Impact factor: 6.064

Review 7.  The Thanatomicrobiome: A Missing Piece of the Microbial Puzzle of Death.

Authors:  Gulnaz T Javan; Sheree J Finley; Zain Abidin; Jennifer G Mulle
Journal:  Front Microbiol       Date:  2016-02-24       Impact factor: 5.640

8.  Microbial Biofilm Community Variation in Flowing Habitats: Potential Utility as Bioindicators of Postmortem Submersion Intervals.

Authors:  Jennifer M Lang; Racheal Erb; Jennifer L Pechal; John R Wallace; Ryan W McEwan; Mark Eric Benbow
Journal:  Microorganisms       Date:  2016-01-04

Review 9.  Thanatomicrobiome composition profiling as a tool for forensic investigation.

Authors:  Wei Zhou; Yingnan Bian
Journal:  Forensic Sci Res       Date:  2018-05-31

10.  Estimating the Postmortem Interval of Carcasses in the Water Using the Carrion Insect, Brain Tissue RNA, Bacterial Biofilm, and Algae.

Authors:  Yu Wang; Man Wang; Wang Xu; Yinghui Wang; Yanan Zhang; Jiangfeng Wang
Journal:  Front Microbiol       Date:  2022-01-04       Impact factor: 5.640

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.