Literature DB >> 26291793

Evidence for a Common Origin of Blacksmiths and Cultivators in the Ethiopian Ari within the Last 4500 Years: Lessons for Clustering-Based Inference.

Lucy van Dorp1, David Balding2, Simon Myers3, Luca Pagani4, Chris Tyler-Smith5, Endashaw Bekele6, Ayele Tarekegn7, Mark G Thomas8, Neil Bradman7, Garrett Hellenthal9.   

Abstract

The Ari peoples of Ethiopia are comprised of different occupational groups that can be distinguished genetically, with Ari Cultivators and the socially marginalised Ari Blacksmiths recently shown to have a similar level of genetic differentiation between them (FST ≈ 0.023 - 0.04) as that observed among multiple ethnic groups sampled throughout Ethiopia. Anthropologists have proposed two competing theories to explain the origins of the Ari Blacksmiths as (i) remnants of a population that inhabited Ethiopia prior to the arrival of agriculturists (e.g. Cultivators), or (ii) relatively recently related to the Cultivators but presently marginalized in the community due to their trade. Two recent studies by different groups analysed genome-wide DNA from samples of Ari Blacksmiths and Cultivators and suggested that genetic patterns between the two groups were more consistent with model (i) and subsequent assimilation of the indigenous peoples into the expanding agriculturalist community. We analysed the same samples using approaches designed to attenuate signals of genetic differentiation that are attributable to allelic drift within a population. By doing so, we provide evidence that the genetic differences between Ari Blacksmiths and Cultivators can be entirely explained by bottleneck effects consistent with hypothesis (ii). This finding serves as both a cautionary tale about interpreting results from unsupervised clustering algorithms, and suggests that social constructions are contributing directly to genetic differentiation over a relatively short time period among previously genetically similar groups.

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Year:  2015        PMID: 26291793      PMCID: PMC4546361          DOI: 10.1371/journal.pgen.1005397

Source DB:  PubMed          Journal:  PLoS Genet        ISSN: 1553-7390            Impact factor:   5.917


  42 in total

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3.  Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies.

Authors:  Daniel Falush; Matthew Stephens; Jonathan K Pritchard
Journal:  Genetics       Date:  2003-08       Impact factor: 4.562

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5.  The allele frequency spectrum in genome-wide human variation data reveals signals of differential demographic history in three large world populations.

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6.  The genetic structure and history of Africans and African Americans.

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Journal:  Science       Date:  2009-04-30       Impact factor: 47.728

7.  Inference of human population history from individual whole-genome sequences.

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Journal:  Nature       Date:  2011-07-13       Impact factor: 49.962

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9.  Early back-to-Africa migration into the Horn of Africa.

Authors:  Jason A Hodgson; Connie J Mulligan; Ali Al-Meeri; Ryan L Raaum
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Authors:  Goncalo R Abecasis; Adam Auton; Lisa D Brooks; Mark A DePristo; Richard M Durbin; Robert E Handsaker; Hyun Min Kang; Gabor T Marth; Gil A McVean
Journal:  Nature       Date:  2012-11-01       Impact factor: 49.962

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  31 in total

1.  Response to Hellenthal et al.

Authors:  Qasim Ayub; Massimo Mezzavilla; Luca Pagani; Marc Haber; Aisha Mohyuddin; Shagufta Khaliq; Syed Qasim Mehdi; Chris Tyler-Smith
Journal:  Am J Hum Genet       Date:  2016-02-04       Impact factor: 11.025

2.  The Genetic Ancestry of Modern Indus Valley Populations from Northwest India.

Authors:  Ajai K Pathak; Anurag Kadian; Alena Kushniarevich; Francesco Montinaro; Mayukh Mondal; Linda Ongaro; Manvendra Singh; Pramod Kumar; Niraj Rai; Jüri Parik; Ene Metspalu; Siiri Rootsi; Luca Pagani; Toomas Kivisild; Mait Metspalu; Gyaneshwer Chaubey; Richard Villems
Journal:  Am J Hum Genet       Date:  2018-12-06       Impact factor: 11.025

3.  Early farmers from across Europe directly descended from Neolithic Aegeans.

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4.  Genome-wide analysis highlights genetic dilution in Algerian sheep.

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5.  Admixture into and within sub-Saharan Africa.

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7.  Hunter-gatherer genomes reveal diverse demographic trajectories during the rise of farming in Eastern Africa.

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Journal:  Curr Biol       Date:  2022-03-09       Impact factor: 10.900

8.  The Genes of Freedom: Genome-Wide Insights into Marronage, Admixture and Ethnogenesis in the Gulf of Guinea.

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Journal:  Genes (Basel)       Date:  2021-05-28       Impact factor: 4.096

Review 9.  Structure and ancestry patterns of Ethiopians in genome-wide autosomal DNA.

Authors:  Garrett Hellenthal; Nancy Bird; Sam Morris
Journal:  Hum Mol Genet       Date:  2021-04-26       Impact factor: 6.150

10.  A Genome-Wide Search for Greek and Jewish Admixture in the Kashmiri Population.

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