Literature DB >> 26289300

Investigation and Expression of the Secoisolariciresinol Dehydrogenase Gene Involved in Podophyllotoxin Biosynthesis.

Sonja L B Arneaud1, John R Porter2.   

Abstract

Podophyllotoxin (PPT) is a plant natural product that serves as a precursor for the synthesis of many well-known chemotherapeutic drugs. The limited availability and high demand for the source plants of PPT have led to the exploration of alternative sources for this compound. In this study, we utilized the endophytic fungus Phialocephala podophylli (strain PPE7) that we isolated from the rhizomes of Podophyllum peltatum and is known to produce detectable amounts of PPT in broth culture. To date, the complete PPT biosynthetic pathway has yet to be determined in any species. Since fungi are well known for clustering genes that belong to secondary metabolite pathways, use of a fungal system for investigation of the PPT biosynthesis genes may ultimately lead to elucidation of the entire pathway. In this study, we investigated the secoisolariciresinol dehydrogenase (SD) gene that facilitates the dehydrogenation of secoisolariciresinol to form matairesinol, a mid-pathway intermediate product in PPT biosynthesis. We utilized PCR amplification to acquire the complete SD gene sequence in PPE7 and opted to synthesize the P. peltatum SD sequence for expression. Through western blotting, we confirmed the expression of the recombinant SD (PpSD) and verified protein functionality with a bioconversion assay followed by HPLC and LC-MS analyses. Here, we report the identification of the SD gene in PPE7; this is the first report of the SD gene in an endophytic fungus. Additionally, we established the groundwork for the future expression of the complete PPT biosynthetic pathway in the heterologous host Pichia pastoris.

Entities:  

Keywords:  Heterologous expression; Phialocephala podophylli; Pichia pastoris; Podophyllotoxin biosynthesis; Podophyllum peltatum; Secoisolariciresinol dehydrogenase; Secondary metabolite

Mesh:

Substances:

Year:  2015        PMID: 26289300     DOI: 10.1007/s12033-015-9888-8

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  27 in total

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Authors:  S Perotto; P Nepote-Fus; L Saletta; C Bandi; J P Young
Journal:  Mol Biol Evol       Date:  2000-01       Impact factor: 16.240

2.  A new and efficient strategy for the synthesis of podophyllotoxin and its analogues.

Authors:  Yingming Wu; Hongbin Zhang; Yuanhong Zhao; Jingfeng Zhao; Jingbo Chen; Liang Li
Journal:  Org Lett       Date:  2007-02-28       Impact factor: 6.005

3.  Stereoselective bimolecular phenoxy radical coupling by an auxiliary (dirigent) protein without an active center.

Authors:  L B Davin; H B Wang; A L Crowell; D L Bedgar; D M Martin; S Sarkanen; N G Lewis
Journal:  Science       Date:  1997-01-17       Impact factor: 47.728

4.  Bioconversion of pinoresinol into matairesinol by use of recombinant Escherichia coli.

Authors:  Han-Jung Kuo; Zhi-Yu Wei; Pei-Chun Lu; Pung-Ling Huang; Kung-Ta Lee
Journal:  Appl Environ Microbiol       Date:  2014-02-21       Impact factor: 4.792

Review 5.  Podophyllotoxin.

Authors:  C Canel; R M Moraes; F E Dayan; D Ferreira
Journal:  Phytochemistry       Date:  2000-05       Impact factor: 4.072

6.  Next generation sequencing in predicting gene function in podophyllotoxin biosynthesis.

Authors:  Joaquim V Marques; Kye-Won Kim; Choonseok Lee; Michael A Costa; Gregory D May; John A Crow; Laurence B Davin; Norman G Lewis
Journal:  J Biol Chem       Date:  2012-11-16       Impact factor: 5.157

7.  Rapid and reliable protein extraction from yeast.

Authors:  V V Kushnirov
Journal:  Yeast       Date:  2000-06-30       Impact factor: 3.239

8.  Secoisolariciresinol dehydrogenase: mode of catalysis and stereospecificity of hydride transfer in Podophyllum peltatum.

Authors:  Syed G A Moinuddin; Buhyun Youn; Diana L Bedgar; Michael A Costa; Gregory L Helms; ChulHee Kang; Laurence B Davin; Norman G Lewis
Journal:  Org Biomol Chem       Date:  2006-01-30       Impact factor: 3.876

Review 9.  Recent progress on C-4-modified podophyllotoxin analogs as potent antitumor agents.

Authors:  Ying-Qian Liu; Jing Tian; Keduo Qian; Xiao-Bo Zhao; Susan L Morris-Natschke; Liu Yang; Xiang Nan; Xuan Tian; Kuo-Hsiung Lee
Journal:  Med Res Rev       Date:  2014-05-14       Impact factor: 12.944

10.  I-TASSER server for protein 3D structure prediction.

Authors:  Yang Zhang
Journal:  BMC Bioinformatics       Date:  2008-01-23       Impact factor: 3.169

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  1 in total

Review 1.  Fungal Endophytes as Efficient Sources of Plant-Derived Bioactive Compounds and Their Prospective Applications in Natural Product Drug Discovery: Insights, Avenues, and Challenges.

Authors:  Archana Singh; Dheeraj K Singh; Ravindra N Kharwar; James F White; Surendra K Gond
Journal:  Microorganisms       Date:  2021-01-19
  1 in total

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