Literature DB >> 26286419

Gas-Phase Retinal Spectroscopy: Temperature Effects Are But a Mirage.

Omar Valsson1, Claudia Filippi1.   

Abstract

We employ state-of-the-art first-principle approaches to investigate whether temperature effects are responsible for the unusually broad and flat spectrum of protonated Schiff base retinal observed in photodissociation spectroscopy, as has recently been proposed. We first carefully calibrate how to construct a realistic geometrical model of retinal and show that the exchange-correlation M06-2X functional yields an accurate description while the commonly used complete active space self-consistent field method (CASSCF) is not adequate. Using modern multiconfigurational perturbative methods (NEVPT2) to compute the excitations, we then demonstrate that conformations with different orientations of the β-ionone ring are characterized by similar excitations. Moreover, other degrees of freedom identified as active in room-temperature molecular dynamics simulations do not yield the shift required to explain the anomalous spectral shape. Our findings indicate that photodissociation experiments are not representative of the optical spectrum of retinal in the gas phase and call for further experimental characterization of the dissociation spectra.

Entities:  

Keywords:  density functional theory calculations; gas-phase absorption; multiconfigurational perturbation theory; photodissociation spectroscopy; retinal chromophore

Year:  2012        PMID: 26286419     DOI: 10.1021/jz300183g

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  2 in total

1.  Assessment of MC-PDFT Excitation Energies for a Set of QM/MM Models of Rhodopsins.

Authors:  María Del Carmen Marín; Luca De Vico; Sijia S Dong; Laura Gagliardi; Donald G Truhlar; Massimo Olivucci
Journal:  J Chem Theory Comput       Date:  2019-02-20       Impact factor: 6.006

2.  Protein Field Effect on the Dark State of 11-cis Retinal in Rhodopsin by Quantum Monte Carlo/Molecular Mechanics.

Authors:  Emanuele Coccia; Daniele Varsano; Leonardo Guidoni
Journal:  J Chem Theory Comput       Date:  2013-01-08       Impact factor: 6.006

  2 in total

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