Literature DB >> 26285052

A Minimum Spanning Forest-Based Method for Noninvasive Cancer Detection With Hyperspectral Imaging.

Robert Pike, Guolan Lu, Dongsheng Wang, Zhuo Georgia Chen, Baowei Fei.   

Abstract

GOAL: The purpose of this paper is to develop a classification method that combines both spectral and spatial information for distinguishing cancer from healthy tissue on hyperspectral images in an animal model.
METHODS: An automated algorithm based on a minimum spanning forest (MSF) and optimal band selection has been proposed to classify healthy and cancerous tissue on hyperspectral images. A support vector machine classifier is trained to create a pixel-wise classification probability map of cancerous and healthy tissue. This map is then used to identify markers that are used to compute mutual information for a range of bands in the hyperspectral image and thus select the optimal bands. An MSF is finally grown to segment the image using spatial and spectral information.
CONCLUSION: The MSF based method with automatically selected bands proved to be accurate in determining the tumor boundary on hyperspectral images. SIGNIFICANCE: Hyperspectral imaging combined with the proposed classification technique has the potential to provide a noninvasive tool for cancer detection.

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Year:  2015        PMID: 26285052      PMCID: PMC4791052          DOI: 10.1109/TBME.2015.2468578

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  28 in total

1.  Spectral-spatial classification of hyperspectral data based on a stochastic minimum spanning forest approach.

Authors:  Kévin Bernard; Yuliya Tarabalka; Jesús Angulo; Jocelyn Chanussot; Jón Atli Benediktsson
Journal:  IEEE Trans Image Process       Date:  2011-11-11       Impact factor: 10.856

2.  Correlation mapping: rapid method for identification of histological features and pathological classification in mid infrared spectroscopic images of lymph nodes.

Authors:  Martin Isabelle; Keith Rogers; Nicholas Stone
Journal:  J Biomed Opt       Date:  2010 Mar-Apr       Impact factor: 3.170

3.  Detection of malignancy in cytology specimens using spectral-spatial analysis.

Authors:  Cesar Angeletti; Neal R Harvey; Vitali Khomitch; Andrew H Fischer; Richard M Levenson; David L Rimm
Journal:  Lab Invest       Date:  2005-12       Impact factor: 5.662

4.  Development of an advanced hyperspectral imaging (HSI) system with applications for cancer detection.

Authors:  Matthew E Martin; Musundi B Wabuyele; Kui Chen; Paul Kasili; Masoud Panjehpour; Mary Phan; Bergein Overholt; Glenn Cunningham; Dale Wilson; Robert C Denovo; Tuan Vo-Dinh
Journal:  Ann Biomed Eng       Date:  2006-05-09       Impact factor: 3.934

Review 5.  Optical spectroscopy for detection of neoplasia.

Authors:  Konstantin Sokolov; Michele Follen; Rebecca Richards-Kortum
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6.  The pivotal role of integrin β1 in metastasis of head and neck squamous cell carcinoma.

Authors:  Dongsheng Wang; Susan Müller; A R M Ruhul Amin; Donghai Huang; Ling Su; Zhongliang Hu; Mohammad Aminur Rahman; Sreenivas Nannapaneni; Lydia Koenig; Zhengjia Chen; Mourad Tighiouart; Dong M Shin; Zhuo G Chen
Journal:  Clin Cancer Res       Date:  2012-07-24       Impact factor: 12.531

7.  Differentiation of normal skin and melanoma using high resolution hyperspectral imaging.

Authors:  David T Dicker; Jeremy Lerner; Pat Van Belle; Stephen F Barth; Dupont Guerry; Meenhard Herlyn; David E Elder; Wafik S El-Deiry
Journal:  Cancer Biol Ther       Date:  2006-08-09       Impact factor: 4.742

Review 8.  Emerging roles for multimodal optical imaging in early cancer detection: a global challenge.

Authors:  Noah Bedard; Mark Pierce; Adel El-Nagger; S Anandasabapathy; Ann Gillenwater; R Richards-Kortum
Journal:  Technol Cancer Res Treat       Date:  2010-04

9.  Hyperspectral Imaging for Cancer Surgical Margin Delineation: Registration of Hyperspectral and Histological Images.

Authors:  Guolan Lu; Luma Halig; Dongsheng Wang; Zhuo Georgia Chen; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2014-03-12

10.  New method for detection of gastric cancer by hyperspectral imaging: a pilot study.

Authors:  Shu Kiyotoki; Jun Nishikawa; Takeshi Okamoto; Kouichi Hamabe; Mari Saito; Atsushi Goto; Yusuke Fujita; Yoshihiko Hamamoto; Yusuke Takeuchi; Shin Satori; Isao Sakaida
Journal:  J Biomed Opt       Date:  2013-02       Impact factor: 3.170

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  17 in total

1.  Detection of Head and Neck Cancer in Surgical Specimens Using Quantitative Hyperspectral Imaging.

Authors:  Guolan Lu; James V Little; Xu Wang; Hongzheng Zhang; Mihir R Patel; Christopher C Griffith; Mark W El-Deiry; Amy Y Chen; Baowei Fei
Journal:  Clin Cancer Res       Date:  2017-06-13       Impact factor: 12.531

2.  Surgical Aid Visualization System for Glioblastoma Tumor Identification based on Deep Learning and In-Vivo Hyperspectral Images of Human Patients.

Authors:  Himar Fabelo; Martin Halicek; Samuel Ortega; Adam Szolna; Jesus Morera; Roberto Sarmiento; Gustavo M Callico; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2019-03-08

3.  [Hyperspectral imaging of gastrointestinal anastomoses].

Authors:  B Jansen-Winkeln; M Maktabi; J P Takoh; S M Rabe; M Barberio; H Köhler; T Neumuth; A Melzer; C Chalopin; I Gockel
Journal:  Chirurg       Date:  2018-09       Impact factor: 0.955

4.  Development of a new polarized hyperspectral imaging microscope.

Authors:  Ximing Zhou; Ling Ma; Martin Halicek; James Dormer; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2020-02-19

5.  Identification of DAPI-stained normal, inflammatory, and carcinoma hepatic cells based on hyperspectral microscopy.

Authors:  Sifan Lin; Ze Ke; Kunxing Liu; Siqi Zhu; Zhen Li; Hao Yin; Zhenqiang Chen
Journal:  Biomed Opt Express       Date:  2022-03-14       Impact factor: 3.562

6.  Detecting brain tumor in pathological slides using hyperspectral imaging.

Authors:  Samuel Ortega; Himar Fabelo; Rafael Camacho; María de la Luz Plaza; Gustavo M Callicó; Roberto Sarmiento
Journal:  Biomed Opt Express       Date:  2018-01-25       Impact factor: 3.732

7.  Superpixel-based spectral classification for the detection of head and neck cancer with hyperspectral imaging.

Authors:  Hyunkoo Chung; Guolan Lu; Zhiqiang Tian; Dongsheng Wang; Zhuo Georgia Chen; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-29

8.  Hyperspectral Imaging of Neoplastic Progression in a Mouse Model of Oral Carcinogenesis.

Authors:  Guolan Lu; Xulei Qin; Dongsheng Wang; Susan Muller; Hongzheng Zhang; Amy Chen; Zhuo Georgia Chen; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-29

9.  Quantitative Diagnosis of Tongue Cancer from Histological Images in an Animal Model.

Authors:  Guolan Lu; Xulei Qin; Dongsheng Wang; Susan Muller; Hongzheng Zhang; Amy Chen; Zhuo Georgia Chen; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-23

10.  Automatic detection of head and neck squamous cell carcinoma on pathologic slides using polarized hyperspectral imaging and machine learning.

Authors:  Ximing Zhou; Ling Ma; William Brown; James V Little; Amy Y Chen; Larry L Myers; Baran D Sumer; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2021-02-15
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