Literature DB >> 26281766

Response of transposable elements to environmental stressors.

Isabelle R Miousse1, Marie-Cecile G Chalbot2, Annie Lumen3, Alesia Ferguson4, Ilias G Kavouras5, Igor Koturbash6.   

Abstract

Transposable elements (TEs) comprise a group of repetitive sequences that bring positive, negative, as well as neutral effects to the host organism. Earlier considered as "junk DNA," TEs are now well-accepted driving forces of evolution and critical regulators of the expression of genetic information. Their activity is regulated by epigenetic mechanisms, including methylation of DNA and histone modifications. The loss of epigenetic control over TEs, exhibited as loss of DNA methylation and decondensation of the chromatin structure, may result in TEs reactivation, initiation of their insertional mutagenesis (retrotransposition) and has been reported in numerous human diseases, including cancer. Accumulating evidence suggests that these alterations are not the simple consequences of the disease, but often may drive the pathogenesis, as they can be detected early during disease development. Knowledge derived from the in vitro, in vivo, and epidemiological studies, clearly demonstrates that exposure to ubiquitous environmental stressors, many of which are carcinogens or suspected carcinogens, are capable of causing alterations in methylation and expression of TEs and initiate retrotransposition events. Evidence summarized in this review suggests that TEs are the sensitive endpoints for detection of effects caused by such environmental stressors, as ionizing radiation (terrestrial, space, and UV-radiation), air pollution (including particulate matter [PM]-derived and gaseous), persistent organic pollutants, and metals. Furthermore, the significance of these effects is characterized by their early appearance, persistence and presence in both, target organs and peripheral blood. Altogether, these findings suggest that TEs may potentially be introduced into safety and risk assessment and serve as biomarkers of exposure to environmental stressors. Furthermore, TEs also show significant potential to become invaluable surrogate biomarkers in clinic and possible targets for therapeutic modalities for disease treatment and prevention.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Air pollution; DNA methylation; Environmental stressors; Ionizing radiation; Metals; Retrotransposition

Mesh:

Substances:

Year:  2015        PMID: 26281766      PMCID: PMC4544780          DOI: 10.1016/j.mrrev.2015.05.003

Source DB:  PubMed          Journal:  Mutat Res Rev Mutat Res        ISSN: 1383-5742            Impact factor:   5.657


  239 in total

1.  Cis-preferential LINE-1 reverse transcriptase activity in ribonucleoprotein particles.

Authors:  Deanna A Kulpa; John V Moran
Journal:  Nat Struct Mol Biol       Date:  2006-06-18       Impact factor: 15.369

Review 2.  Environmental epigenetics in metal exposure.

Authors:  Ricardo Martinez-Zamudio; Hyo Chol Ha
Journal:  Epigenetics       Date:  2011-07-01       Impact factor: 4.528

3.  Human L1 element target-primed reverse transcription in vitro.

Authors:  Gregory J Cost; Qinghua Feng; Alain Jacquier; Jef D Boeke
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

4.  Reactivation of L1 retrotransposon by benzo(a)pyrene involves complex genetic and epigenetic regulation.

Authors:  Ivo Teneng; Diego E Montoya-Durango; James L Quertermous; Mary E Lacy; Kenneth S Ramos
Journal:  Epigenetics       Date:  2011-03-01       Impact factor: 4.528

5.  Regulation of human endogenous retrovirus-K expression in melanomas by CpG methylation.

Authors:  Sven Stengel; Uwe Fiebig; Reinhard Kurth; Joachim Denner
Journal:  Genes Chromosomes Cancer       Date:  2010-05       Impact factor: 5.006

6.  High LET (56)Fe ion irradiation induces tissue-specific changes in DNA methylation in the mouse.

Authors:  Florence Lima; Dacheng Ding; Wilfried Goetz; Austin J Yang; Janet E Baulch
Journal:  Environ Mol Mutagen       Date:  2013-11-30       Impact factor: 3.216

7.  Mercury specifically induces LINE-1 activity in a human neuroblastoma cell line.

Authors:  Laleh Habibi; Mohammad Ali Shokrgozar; Mina Tabrizi; Mohammad Hossein Modarressi; Seyed Mohammad Akrami
Journal:  Mutat Res Genet Toxicol Environ Mutagen       Date:  2013-11-13       Impact factor: 2.873

8.  Early-life cadmium exposure and child development in 5-year-old girls and boys: a cohort study in rural Bangladesh.

Authors:  Maria Kippler; Fahmida Tofail; Jena D Hamadani; Renee M Gardner; Sally M Grantham-McGregor; Matteo Bottai; Marie Vahter
Journal:  Environ Health Perspect       Date:  2012-07-03       Impact factor: 9.031

9.  A single whole-body low dose X-irradiation does not affect L1, B1 and IAP repeat element DNA methylation longitudinally.

Authors:  Michelle R Newman; Pamela J Sykes; Benjamin J Blyth; Eva Bezak; Mark D Lawrence; Katherine L Morel; Rebecca J Ormsby
Journal:  PLoS One       Date:  2014-03-27       Impact factor: 3.240

10.  Genome-wide screen of DNA methylation changes induced by low dose X-ray radiation in mice.

Authors:  Jingzi Wang; Youwei Zhang; Kai Xu; Xiaobei Mao; Lijun Xue; Xiaobei Liu; Hongjun Yu; Longbang Chen; Xiaoyuan Chu
Journal:  PLoS One       Date:  2014-03-10       Impact factor: 3.240

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  54 in total

Review 1.  DNA Methylation in Radiation-Induced Carcinogenesis: Experimental Evidence and Clinical Perspectives.

Authors:  Isabelle R Miousse; Laura E Ewing; Kristy R Kutanzi; Robert J Griffin; Igor Koturbash
Journal:  Crit Rev Oncog       Date:  2018

2.  Changes in one-carbon metabolism and DNA methylation in the hearts of mice exposed to space environment-relevant doses of oxygen ions (16O).

Authors:  Isabelle R Miousse; Charles M Skinner; Vijayalakshmi Sridharan; John W Seawright; Preeti Singh; Reid D Landes; Amrita K Cheema; Martin Hauer-Jensen; Marjan Boerma; Igor Koturbash
Journal:  Life Sci Space Res (Amst)       Date:  2019-05-31

3.  Dose-response analysis of epigenetic, metabolic, and apical endpoints after short-term exposure to experimental hepatotoxicants.

Authors:  Isabelle R Miousse; Lynea A Murphy; Haixia Lin; Melissa R Schisler; Jinchun Sun; Marie-Cecile G Chalbot; Radhakrishna Sura; Kamin Johnson; Matthew J LeBaron; Ilias G Kavouras; Laura K Schnackenberg; Richard D Beger; Reza J Rasoulpour; Igor Koturbash
Journal:  Food Chem Toxicol       Date:  2017-05-08       Impact factor: 6.023

4.  Densely ionizing radiation affects DNA methylation of selective LINE-1 elements.

Authors:  Sara Prior; Isabelle R Miousse; Etienne Nzabarushimana; Rupak Pathak; Charles Skinner; Kristy R Kutanzi; Antiño R Allen; Jacob Raber; Alan J Tackett; Martin Hauer-Jensen; Gregory A Nelson; Igor Koturbash
Journal:  Environ Res       Date:  2016-07-14       Impact factor: 6.498

5.  Transcriptomic responses of the endangered freshwater mussel Margaritifera margaritifera to trace metal contamination in the Dronne River, France.

Authors:  Anthony Bertucci; Fabien Pierron; Julien Thébault; Christophe Klopp; Julie Bellec; Patrice Gonzalez; Magalie Baudrimont
Journal:  Environ Sci Pollut Res Int       Date:  2017-09-30       Impact factor: 4.223

6.  LINE-1 in response to exposure to ionizing radiation.

Authors:  Igor Koturbash
Journal:  Mob Genet Elements       Date:  2017-10-19

Review 7.  Living Organisms Author Their Read-Write Genomes in Evolution.

Authors:  James A Shapiro
Journal:  Biology (Basel)       Date:  2017-12-06

8.  Differential pulmonary effects of wintertime California and China particulate matter in healthy young mice.

Authors:  Xiaolin Sun; Haiying Wei; Dominique E Young; Keith J Bein; Suzette M Smiley-Jewell; Qi Zhang; Ciara Catherine B Fulgar; Alejandro R Castañeda; Alexa K Pham; Wei Li; Kent E Pinkerton
Journal:  Toxicol Lett       Date:  2017-07-08       Impact factor: 4.372

Review 9.  Effects of ionizing radiation on DNA methylation: from experimental biology to clinical applications.

Authors:  Isabelle R Miousse; Kristy R Kutanzi; Igor Koturbash
Journal:  Int J Radiat Biol       Date:  2017-02-21       Impact factor: 2.694

10.  Association of Serotonin Transporter Gene AluJb Methylation with Major Depression, Amygdala Responsiveness, 5-HTTLPR/rs25531 Polymorphism, and Stress.

Authors:  Ilona Schneider; Harald Kugel; Ronny Redlich; Dominik Grotegerd; Christian Bürger; Paul-Christian Bürkner; Nils Opel; Katharina Dohm; Dario Zaremba; Susanne Meinert; Nina Schröder; Anna Milena Straßburg; Kathrin Schwarte; Christiane Schettler; Oliver Ambrée; Stephan Rust; Katharina Domschke; Volker Arolt; Walter Heindel; Bernhard T Baune; Weiqi Zhang; Udo Dannlowski; Christa Hohoff
Journal:  Neuropsychopharmacology       Date:  2017-11-07       Impact factor: 7.853

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