Literature DB >> 26279928

Crystal structure of (E)-1-{[(3,5-di-methyl-phen-yl)imino]-meth-yl}naphthalen-2-ol.

Ahmed M Abu-Dief1, Mohammed S M Abdelbaky2, Santiago Garcia-Granda2.   

Abstract

The title compound, C19H17NO, has an E conformation about the N=C bond. The mol-ecule is relatively planar, with the benzene ring and naphthalene ring plane being inclined to one another by 4.28 (10)°. There is an intra-molecular O-H⋯N hydrogen bond generating an S(6) ring motif. In the crystal, mol-ecules are linked via C-H⋯O hydrogen bonds, forming chains propagating along [100]. Within the chains there are π-π inter-actions involving the benzene ring and the naphthalene ring system of an adjacent mol-ecule [inter-centroid distance = 3.6405 (14) Å].

Entities:  

Keywords:  Schiff base; crystal structure; hydrogen bonding; imino; naphthalen-2-ol

Year:  2015        PMID: 26279928      PMCID: PMC4518976          DOI: 10.1107/S2056989015011548

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the diverse applications and biological activities of Schiff bases, see: Schiff (1864 ▸); Dutta & Das (1988 ▸); Chandra & Sangeetika (2004 ▸); Cozzi (2004 ▸). For the biological activity and optical properties of Schiff bases derived from 2-hy­droxy­napthaldehyde, see: Abdel-Rahman et al. (2013a ▸,b ▸, 2014 ▸); Abu-Dief et al. (2013 ▸).

Experimental

Crystal data

C19H17NO M = 275.33 Orthorhombic, a = 6.2463 (2) Å b = 10.2438 (3) Å c = 23.0533 (8) Å V = 1475.08 (8) Å3 Z = 4 Cu Kα radiation μ = 0.60 mm−1 T = 293 K 0.73 × 0.12 × 0.09 mm

Data collection

Oxford Diffraction Xcalibur (Ruby, Gemini) diffractometer Absorption correction: analytical (CrysAlis PRO; Oxford Diffraction, 2010 ▸) T min = 0.915, T max = 0.94 8103 measured reflections 2834 independent reflections 1422 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.121 S = 1.09 1649 reflections 193 parameters H-atom parameters constrained Δρmax = 0.17 e Å−3 Δρmin = −0.14 e Å−3

Data collection: CrysAlis CCD (Oxford Diffraction, 2010 ▸); cell refinement: CrysAlis CCD; data reduction: CrysAlis RED (Oxford Diffraction, 2010 ▸); program(s) used to solve structure: SIR2011 (Burla et al., 2015 ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015 ▸); molecular graphics: Mercury (Macrae et al., 2008 ▸); software used to prepare material for publication: SHELXL2014 and PLATON (Spek, 2009 ▸). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015011548/su5133sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015011548/su5133Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015011548/su5133Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015011548/su5133fig1.tif A view of the mol­ecular structure of the title compound, with atom labelling. Displacement ellipsoids are drawn at the 50% probability level. The intra­molecular O—H⋯N hydrogen bond is shown as a dashed line (see Table 1 for details). Click here for additional data file. b . DOI: 10.1107/S2056989015011548/su5133fig2.tif A view along the b axis of the crystal packing of the title compound. Hydrogen bonds are shown as dashed lines (see Table 1 for details). H atoms not involved in these inter­actions have been omitted for clarity. CCDC reference: 1406684 Additional supporting information: crystallographic information; 3D view; checkCIF report
C19H17NODx = 1.240 Mg m3
Mr = 275.33Cu Kα radiation, λ = 1.54184 Å
Orthorhombic, P212121Cell parameters from 2417 reflections
a = 6.2463 (2) Åθ = 3.8–69.9°
b = 10.2438 (3) ŵ = 0.60 mm1
c = 23.0533 (8) ÅT = 293 K
V = 1475.08 (8) Å3Prism, colourless
Z = 40.73 × 0.12 × 0.09 mm
F(000) = 584
Oxford Diffraction Xcalibur (Ruby, Gemini) diffractometer2834 independent reflections
Radiation source: Enhance (Cu) X-ray Source1422 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.032
Detector resolution: 10.2673 pixels mm-1θmax = 70.4°, θmin = 3.8°
ω scansh = −7→6
Absorption correction: analytical (CrysAlis PRO; Oxford Diffraction, 2010)k = −12→12
Tmin = 0.915, Tmax = 0.94l = −27→28
8103 measured reflections
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.041H-atom parameters constrained
wR(F2) = 0.121w = 1/[σ2(Fo2) + (0.0778P)2 + 0.0057P] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max = 0.001
1649 reflectionsΔρmax = 0.17 e Å3
193 parametersΔρmin = −0.14 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
O10.6500 (4)0.7247 (2)0.05918 (10)0.0874 (7)
H10.74730.67100.05840.131*
N10.8802 (3)0.53539 (18)0.09101 (9)0.0551 (5)
C10.5709 (3)0.6003 (2)0.14386 (10)0.0511 (5)
C20.5267 (4)0.7006 (2)0.10264 (13)0.0641 (7)
C30.3348 (5)0.7757 (2)0.10869 (14)0.0740 (8)
H30.30380.84040.08170.089*
C40.1983 (4)0.7542 (3)0.15291 (13)0.0703 (7)
H40.07400.80400.15540.084*
C50.0928 (5)0.6360 (3)0.24126 (13)0.0712 (7)
H5−0.02930.68770.24370.085*
C60.1263 (5)0.5409 (3)0.28162 (13)0.0794 (8)
H60.02710.52750.31110.095*
C70.3088 (5)0.4643 (3)0.27857 (12)0.0728 (7)
H70.33220.39970.30620.087*
C80.4552 (4)0.4833 (3)0.23502 (11)0.0614 (6)
H80.57720.43140.23380.074*
C90.4256 (4)0.5796 (2)0.19192 (10)0.0524 (5)
C100.2386 (4)0.6573 (2)0.19625 (11)0.0577 (6)
C110.7513 (4)0.5198 (2)0.13492 (10)0.0508 (5)
H110.77910.45330.16130.061*
C121.0636 (4)0.4608 (2)0.07758 (10)0.0516 (5)
C131.1710 (4)0.4957 (2)0.02723 (11)0.0590 (6)
H131.11940.56400.00460.071*
C141.3542 (4)0.4297 (2)0.01026 (12)0.0639 (6)
C151.4288 (4)0.3287 (2)0.04512 (12)0.0644 (7)
H151.55110.28340.03400.077*
C161.3257 (4)0.2940 (2)0.09578 (12)0.0599 (6)
C171.1405 (4)0.3596 (2)0.11176 (11)0.0562 (6)
H171.06800.33590.14540.067*
C181.4130 (5)0.1868 (3)0.13355 (14)0.0790 (8)
H18A1.50030.12950.11060.119*
H18B1.29650.13830.15010.119*
H18C1.49790.22410.16400.119*
C191.4706 (6)0.4694 (3)−0.04430 (15)0.0950 (11)
H19A1.43510.5581−0.05380.142*
H19B1.42860.4132−0.07560.142*
H19C1.62220.4622−0.03820.142*
U11U22U33U12U13U23
O10.0695 (12)0.0857 (13)0.1071 (15)0.0178 (11)0.0232 (13)0.0409 (12)
N10.0420 (9)0.0567 (9)0.0667 (11)0.0027 (9)0.0022 (10)0.0052 (8)
C10.0410 (10)0.0505 (10)0.0618 (13)−0.0015 (9)−0.0034 (11)−0.0022 (9)
C20.0518 (13)0.0585 (12)0.0819 (17)0.0050 (12)0.0038 (14)0.0120 (12)
C30.0656 (15)0.0588 (13)0.098 (2)0.0161 (14)0.0032 (18)0.0149 (13)
C40.0542 (13)0.0616 (13)0.095 (2)0.0151 (12)0.0018 (15)−0.0004 (13)
C50.0516 (13)0.0851 (17)0.0770 (17)0.0037 (13)0.0034 (14)−0.0138 (14)
C60.0640 (16)0.106 (2)0.0685 (17)−0.0055 (18)0.0119 (15)−0.0069 (16)
C70.0659 (16)0.0889 (18)0.0638 (15)−0.0074 (16)0.0016 (14)0.0051 (13)
C80.0529 (13)0.0698 (13)0.0616 (14)0.0036 (12)−0.0019 (12)0.0015 (11)
C90.0438 (11)0.0546 (11)0.0587 (13)−0.0040 (10)−0.0046 (11)−0.0066 (10)
C100.0457 (11)0.0606 (12)0.0668 (15)0.0009 (11)−0.0022 (12)−0.0110 (11)
C110.0428 (10)0.0513 (10)0.0583 (13)−0.0011 (9)−0.0034 (10)0.0025 (10)
C120.0405 (10)0.0494 (10)0.0648 (14)−0.0027 (10)−0.0009 (10)−0.0009 (9)
C130.0590 (14)0.0536 (10)0.0645 (13)0.0000 (11)0.0065 (13)0.0035 (10)
C140.0592 (14)0.0570 (12)0.0757 (16)−0.0041 (12)0.0136 (14)−0.0058 (11)
C150.0512 (13)0.0542 (11)0.0877 (18)0.0019 (11)0.0070 (14)−0.0090 (12)
C160.0475 (12)0.0523 (11)0.0801 (16)−0.0003 (11)−0.0040 (14)−0.0031 (11)
C170.0474 (11)0.0554 (11)0.0658 (14)−0.0006 (11)−0.0007 (12)0.0042 (10)
C180.0670 (16)0.0714 (15)0.099 (2)0.0149 (14)−0.0076 (17)0.0115 (14)
C190.096 (2)0.0869 (18)0.102 (2)0.0041 (19)0.046 (2)0.0044 (17)
O1—C21.287 (3)C8—H80.9300
O1—H10.8200C9—C101.417 (3)
N1—C111.304 (3)C11—H110.9300
N1—C121.411 (3)C12—C131.387 (3)
C1—C111.411 (3)C12—C171.388 (3)
C1—C21.427 (3)C13—C141.385 (3)
C1—C91.448 (3)C13—H130.9300
C2—C31.431 (4)C14—C151.391 (4)
C3—C41.347 (4)C14—C191.509 (4)
C3—H30.9300C15—C161.380 (4)
C4—C101.431 (4)C15—H150.9300
C4—H40.9300C16—C171.388 (3)
C5—C61.363 (4)C16—C181.504 (3)
C5—C101.398 (4)C17—H170.9300
C5—H50.9300C18—H18A0.9600
C6—C71.386 (4)C18—H18B0.9600
C6—H60.9300C18—H18C0.9600
C7—C81.372 (4)C19—H19A0.9600
C7—H70.9300C19—H19B0.9600
C8—C91.412 (3)C19—H19C0.9600
C2—O1—H1109.5N1—C11—H11118.8
C11—N1—C12127.3 (2)C1—C11—H11118.8
C11—C1—C2118.6 (2)C13—C12—C17120.0 (2)
C11—C1—C9121.8 (2)C13—C12—N1115.9 (2)
C2—C1—C9119.6 (2)C17—C12—N1124.1 (2)
O1—C2—C1122.7 (2)C14—C13—C12120.7 (2)
O1—C2—C3118.3 (2)C14—C13—H13119.7
C1—C2—C3119.0 (2)C12—C13—H13119.7
C4—C3—C2121.1 (2)C13—C14—C15118.5 (2)
C4—C3—H3119.5C13—C14—C19120.1 (3)
C2—C3—H3119.5C15—C14—C19121.4 (2)
C3—C4—C10122.0 (2)C16—C15—C14121.6 (2)
C3—C4—H4119.0C16—C15—H15119.2
C10—C4—H4119.0C14—C15—H15119.2
C6—C5—C10121.2 (3)C15—C16—C17119.2 (2)
C6—C5—H5119.4C15—C16—C18120.6 (2)
C10—C5—H5119.4C17—C16—C18120.2 (3)
C5—C6—C7119.8 (3)C16—C17—C12120.0 (2)
C5—C6—H6120.1C16—C17—H17120.0
C7—C6—H6120.1C12—C17—H17120.0
C8—C7—C6120.3 (3)C16—C18—H18A109.5
C8—C7—H7119.8C16—C18—H18B109.5
C6—C7—H7119.8H18A—C18—H18B109.5
C7—C8—C9121.8 (2)C16—C18—H18C109.5
C7—C8—H8119.1H18A—C18—H18C109.5
C9—C8—H8119.1H18B—C18—H18C109.5
C8—C9—C10116.8 (2)C14—C19—H19A109.5
C8—C9—C1124.0 (2)C14—C19—H19B109.5
C10—C9—C1119.2 (2)H19A—C19—H19B109.5
C5—C10—C9120.1 (2)C14—C19—H19C109.5
C5—C10—C4120.8 (2)H19A—C19—H19C109.5
C9—C10—C4119.1 (2)H19B—C19—H19C109.5
N1—C11—C1122.4 (2)
C11—C1—C2—O1−3.3 (4)C1—C9—C10—C40.0 (3)
C9—C1—C2—O1179.5 (2)C3—C4—C10—C5−179.2 (3)
C11—C1—C2—C3174.9 (2)C3—C4—C10—C9−1.3 (4)
C9—C1—C2—C3−2.2 (4)C12—N1—C11—C1−179.6 (2)
O1—C2—C3—C4179.3 (3)C2—C1—C11—N11.2 (3)
C1—C2—C3—C41.0 (4)C9—C1—C11—N1178.2 (2)
C2—C3—C4—C100.8 (4)C11—N1—C12—C13178.5 (2)
C10—C5—C6—C70.6 (4)C11—N1—C12—C17−2.8 (4)
C5—C6—C7—C8−0.3 (4)C17—C12—C13—C140.6 (4)
C6—C7—C8—C9−0.5 (4)N1—C12—C13—C14179.4 (2)
C7—C8—C9—C100.9 (4)C12—C13—C14—C15−0.6 (4)
C7—C8—C9—C1−177.6 (2)C12—C13—C14—C19−179.4 (3)
C11—C1—C9—C83.1 (3)C13—C14—C15—C16−0.4 (4)
C2—C1—C9—C8−179.8 (2)C19—C14—C15—C16178.4 (3)
C11—C1—C9—C10−175.3 (2)C14—C15—C16—C171.4 (4)
C2—C1—C9—C101.7 (3)C14—C15—C16—C18−178.3 (3)
C6—C5—C10—C9−0.1 (4)C15—C16—C17—C12−1.4 (3)
C6—C5—C10—C4177.8 (3)C18—C16—C17—C12178.3 (2)
C8—C9—C10—C5−0.6 (3)C13—C12—C17—C160.4 (3)
C1—C9—C10—C5177.9 (2)N1—C12—C17—C16−178.3 (2)
C8—C9—C10—C4−178.5 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.821.782.523 (3)149
C13—H13···O1i0.932.623.492 (3)156
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
O1H1N10.821.782.523(3)149
C13H13O1i 0.932.623.492(3)156

Symmetry code: (i) .

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