Literature DB >> 26279899

Crystal structure of 3,4-di-chloro-anilinium hydrogen phthalate.

Muhammad Shahid1, Muhammad Nawaz Tahir2, Muhammad Salim1, Munawar Ali Munawar1.   

Abstract

In the title salt, C6H6Cl2N(+)·C8H5O4 (-), the carb-oxy-lic acid and carboxyl-ate groups of the anion form dihedral angles of 20.79 (19) and 74.76 (14)°, respectively, with the plane of the benzene ring. In the crystal, mol-ecules are assembled into a two-dimensional polymeric network parallel to (100) via N-H⋯O and O-H⋯O hydrogen bonds. In addition, within the layer, there are π-π stacking inter-actions between the benzene rings of the cation and the anion [centroid-centroid distance = 3.6794 (17) Å]. A weak C-H⋯O interaction is also observed.

Entities:  

Keywords:  crystal structure; hydrogen bonding; hydrogen phthalate; π–π stacking inter­actions

Year:  2015        PMID: 26279899      PMCID: PMC4518937          DOI: 10.1107/S2056989015010300

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For related structures, see: Jagan & Sivakumar (2009 ▸, 2011 ▸); Kozma et al. (1994 ▸); Liang et al. (2011 ▸); Liu (2012 ▸).

Experimental

Crystal data

C6H6Cl2NC8H5O4 M = 328.14 Monoclinic, a = 29.694 (5) Å b = 7.7536 (13) Å c = 13.125 (2) Å β = 98.673 (12)° V = 2987.3 (9) Å3 Z = 8 Mo Kα radiation μ = 0.45 mm−1 T = 296 K 0.34 × 0.28 × 0.16 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▸) T min = 0.860, T max = 0.935 11652 measured reflections 3248 independent reflections 1849 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.133 S = 1.02 3248 reflections 192 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.26 e Å−3

Data collection: APEX2 (Bruker, 2007 ▸); cell refinement: SAINT (Bruker, 2007 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸) and PLATON (Spek, 2009 ▸); software used to prepare material for publication: WinGX (Farrugia, 2012 ▸) and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015010300/gk2633sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015010300/gk2633Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015010300/gk2633Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015010300/gk2633fig1.tif View of the title compound with the atom numbering scheme. The displacement ellipsoids are drawn at the 50% probability level. H-atoms are shown as small circles of arbitrary radii. Click here for additional data file. PLATON . DOI: 10.1107/S2056989015010300/gk2633fig2.tif The packing (PLATON; Spek, 2009) of two-dimensional (100) polymeric networks. Click here for additional data file. . DOI: 10.1107/S2056989015010300/gk2633fig3.tif Hydrogen bonds within (100) layer. CCDC reference: 1403731 Additional supporting information: crystallographic information; 3D view; checkCIF report
C6H6Cl2N+·C8H5O4F(000) = 1344
Mr = 328.14Dx = 1.459 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
a = 29.694 (5) ÅCell parameters from 1849 reflections
b = 7.7536 (13) Åθ = 2.8–27.0°
c = 13.125 (2) ŵ = 0.45 mm1
β = 98.673 (12)°T = 296 K
V = 2987.3 (9) Å3Plate, colorless
Z = 80.34 × 0.28 × 0.16 mm
Bruker Kappa APEXII CCD diffractometer3248 independent reflections
Radiation source: fine-focus sealed tube1849 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.051
Detector resolution: 7.80 pixels mm-1θmax = 27.0°, θmin = 2.8°
ω scansh = −37→37
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −9→9
Tmin = 0.860, Tmax = 0.935l = −15→16
11652 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.133H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0503P)2 + 2.3478P] where P = (Fo2 + 2Fc2)/3
3248 reflections(Δ/σ)max < 0.001
192 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.21968 (8)0.5928 (3)0.41451 (18)0.0727 (7)
O20.23502 (6)0.8002 (2)0.30759 (13)0.0427 (5)
H20.25900.74710.30960.064*
O30.21509 (6)1.1573 (2)0.37561 (12)0.0417 (5)
O40.19151 (5)1.1301 (2)0.20757 (12)0.0377 (4)
C10.20865 (9)0.7204 (4)0.3646 (2)0.0416 (7)
C20.16278 (8)0.8021 (4)0.35827 (18)0.0379 (6)
C30.15350 (8)0.9708 (4)0.32373 (16)0.0340 (6)
C40.10931 (9)1.0324 (4)0.3140 (2)0.0476 (7)
H40.10291.14430.29070.057*
C50.07466 (10)0.9285 (5)0.3386 (2)0.0575 (9)
H50.04510.97090.33160.069*
C60.08358 (10)0.7643 (5)0.3731 (2)0.0654 (10)
H60.06010.69570.39000.078*
C70.12732 (10)0.6995 (4)0.3830 (2)0.0533 (8)
H70.13320.58720.40630.064*
C80.18979 (8)1.0937 (3)0.30026 (18)0.0324 (6)
Cl10.03331 (3)0.83295 (14)0.06616 (8)0.0831 (4)
Cl20.04230 (3)0.44073 (16)0.13559 (9)0.0970 (4)
N10.20521 (7)0.8466 (3)0.07778 (14)0.0374 (5)
H1A0.20410.94660.11060.056*
H1B0.20570.86620.01110.056*
H1C0.23030.78950.10430.056*
C90.16540 (8)0.7446 (4)0.08969 (16)0.0334 (6)
C100.12353 (8)0.8247 (4)0.07404 (18)0.0396 (6)
H100.12110.94030.05510.047*
C110.08537 (9)0.7318 (4)0.0867 (2)0.0496 (8)
C120.08933 (9)0.5597 (5)0.1155 (2)0.0530 (8)
C130.13137 (10)0.4807 (4)0.1296 (2)0.0526 (8)
H130.13390.36490.14800.063*
C140.16975 (9)0.5740 (4)0.1163 (2)0.0440 (7)
H140.19820.52140.12530.053*
U11U22U33U12U13U23
O10.0725 (15)0.0638 (16)0.0883 (17)0.0207 (12)0.0337 (12)0.0404 (14)
O20.0415 (10)0.0463 (12)0.0432 (10)0.0097 (9)0.0159 (9)0.0077 (9)
O30.0421 (10)0.0544 (13)0.0293 (9)−0.0072 (9)0.0077 (8)−0.0073 (9)
O40.0425 (10)0.0423 (12)0.0297 (9)−0.0029 (8)0.0099 (7)0.0012 (8)
C10.0494 (16)0.0422 (18)0.0352 (14)0.0016 (14)0.0130 (12)0.0024 (13)
C20.0431 (15)0.0443 (17)0.0289 (13)−0.0027 (13)0.0134 (11)0.0022 (12)
C30.0350 (13)0.0466 (18)0.0215 (12)−0.0019 (12)0.0081 (10)−0.0032 (11)
C40.0389 (15)0.060 (2)0.0461 (16)0.0032 (14)0.0129 (12)0.0022 (14)
C50.0377 (16)0.079 (3)0.0589 (19)−0.0002 (16)0.0161 (14)0.0029 (18)
C60.0465 (18)0.087 (3)0.067 (2)−0.0160 (19)0.0239 (15)0.001 (2)
C70.0604 (19)0.054 (2)0.0493 (17)−0.0114 (16)0.0211 (14)0.0061 (15)
C80.0333 (13)0.0358 (15)0.0297 (13)0.0046 (11)0.0103 (10)−0.0041 (11)
Cl10.0388 (4)0.1064 (9)0.1041 (7)0.0154 (5)0.0106 (4)0.0168 (6)
Cl20.0625 (6)0.1052 (9)0.1236 (9)−0.0304 (6)0.0149 (5)0.0246 (7)
N10.0389 (12)0.0462 (15)0.0275 (10)0.0019 (10)0.0061 (9)−0.0017 (10)
C90.0376 (14)0.0429 (17)0.0205 (11)−0.0011 (12)0.0069 (10)−0.0035 (11)
C100.0409 (15)0.0439 (18)0.0344 (13)0.0058 (13)0.0074 (11)0.0020 (12)
C110.0374 (15)0.067 (2)0.0450 (16)0.0050 (15)0.0073 (12)0.0014 (15)
C120.0451 (17)0.065 (2)0.0493 (17)−0.0126 (16)0.0076 (13)0.0005 (16)
C130.060 (2)0.0458 (19)0.0521 (17)−0.0053 (16)0.0104 (14)0.0020 (15)
C140.0440 (16)0.0467 (19)0.0412 (15)0.0064 (14)0.0057 (12)−0.0002 (13)
O1—C11.204 (3)C7—H70.9300
O2—C11.316 (3)Cl1—C111.718 (3)
O2—H20.8200Cl2—C121.726 (3)
O3—C81.250 (3)N1—C91.450 (3)
O4—C81.257 (3)N1—H1A0.8900
C1—C21.493 (4)N1—H1B0.8900
C2—C71.396 (4)N1—H1C0.8900
C2—C31.398 (4)C9—C141.369 (4)
C3—C41.384 (3)C9—C101.377 (3)
C3—C81.505 (3)C10—C111.374 (4)
C4—C51.383 (4)C10—H100.9300
C4—H40.9300C11—C121.388 (5)
C5—C61.364 (5)C12—C131.378 (4)
C5—H50.9300C13—C141.383 (4)
C6—C71.380 (4)C13—H130.9300
C6—H60.9300C14—H140.9300
C1—O2—H2109.5C9—N1—H1A109.5
O1—C1—O2124.0 (3)C9—N1—H1B109.5
O1—C1—C2123.3 (2)H1A—N1—H1B109.5
O2—C1—C2112.6 (2)C9—N1—H1C109.5
C7—C2—C3119.3 (3)H1A—N1—H1C109.5
C7—C2—C1117.3 (3)H1B—N1—H1C109.5
C3—C2—C1123.2 (2)C14—C9—C10121.5 (2)
C4—C3—C2119.4 (2)C14—C9—N1120.5 (2)
C4—C3—C8117.4 (3)C10—C9—N1118.1 (2)
C2—C3—C8123.1 (2)C11—C10—C9119.2 (3)
C5—C4—C3120.4 (3)C11—C10—H10120.4
C5—C4—H4119.8C9—C10—H10120.4
C3—C4—H4119.8C10—C11—C12120.0 (3)
C6—C5—C4120.5 (3)C10—C11—Cl1118.7 (3)
C6—C5—H5119.8C12—C11—Cl1121.3 (2)
C4—C5—H5119.8C13—C12—C11120.1 (3)
C5—C6—C7120.3 (3)C13—C12—Cl2118.7 (3)
C5—C6—H6119.9C11—C12—Cl2121.2 (2)
C7—C6—H6119.9C12—C13—C14119.9 (3)
C6—C7—C2120.2 (3)C12—C13—H13120.1
C6—C7—H7119.9C14—C13—H13120.1
C2—C7—H7119.9C9—C14—C13119.3 (3)
O3—C8—O4124.7 (2)C9—C14—H14120.3
O3—C8—C3116.8 (2)C13—C14—H14120.3
O4—C8—C3118.4 (2)
O1—C1—C2—C7−20.8 (4)C2—C3—C8—O3−74.5 (3)
O2—C1—C2—C7157.5 (2)C4—C3—C8—O4−74.4 (3)
O1—C1—C2—C3162.9 (3)C2—C3—C8—O4108.1 (3)
O2—C1—C2—C3−18.9 (4)C14—C9—C10—C110.8 (4)
C7—C2—C3—C4−0.5 (4)N1—C9—C10—C11−178.8 (2)
C1—C2—C3—C4175.8 (2)C9—C10—C11—C120.4 (4)
C7—C2—C3—C8176.9 (2)C9—C10—C11—Cl1−179.63 (18)
C1—C2—C3—C8−6.8 (4)C10—C11—C12—C13−1.3 (4)
C2—C3—C4—C50.3 (4)Cl1—C11—C12—C13178.8 (2)
C8—C3—C4—C5−177.2 (2)C10—C11—C12—Cl2178.2 (2)
C3—C4—C5—C60.2 (4)Cl1—C11—C12—Cl2−1.8 (4)
C4—C5—C6—C7−0.5 (5)C11—C12—C13—C140.9 (4)
C5—C6—C7—C20.3 (5)Cl2—C12—C13—C14−178.6 (2)
C3—C2—C7—C60.2 (4)C10—C9—C14—C13−1.2 (4)
C1—C2—C7—C6−176.3 (3)N1—C9—C14—C13178.5 (2)
C4—C3—C8—O3102.9 (3)C12—C13—C14—C90.3 (4)
D—H···AD—HH···AD···AD—H···A
O2—H2···O4i0.821.772.583 (2)171
N1—H1A···O40.891.982.848 (3)164
N1—H1B···O3ii0.891.852.713 (3)163
N1—H1C···O3i0.891.902.774 (3)165
C13—H13···O4iii0.932.543.328 (4)143
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
O2H2O4i 0.821.772.583(2)171
N1H1AO40.891.982.848(3)164
N1H1BO3ii 0.891.852.713(3)163
N1H1CO3i 0.891.902.774(3)165
C13H13O4iii 0.932.543.328(4)143

Symmetry codes: (i) ; (ii) ; (iii) .

  7 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Self-assembled supramolecular sheet- and channel-type frameworks in the p-phenetidinium hydrogen phthalate and cyclohexylaminium hydrogen phthalate hemihydrate salts.

Authors:  R Jagan; K Sivakumar
Journal:  Acta Crystallogr C       Date:  2011-09-02       Impact factor: 1.172

3.  N-H...O and O-H...O hydrogen-bonded supramolecular networks in 4-chloroanilinium, 2-hydroxyanilinium and 3-hydroxyanilinium hydrogen phthalates.

Authors:  R Jagan; K Sivakumar
Journal:  Acta Crystallogr C       Date:  2009-07-18       Impact factor: 1.172

4.  4-Bromo-anilinium hydrogen phthalate.

Authors:  Zu Pei Liang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-14

5.  3-Methyl-anilinium hydrogen phthalate.

Authors:  Ming-Liang Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-23

6.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total

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