Literature DB >> 26279894

Crystal structure of catena-poly[[di-aqua-cobalt(II)]-bis-[μ-5-(4-carb-oxy-ylato-phenyl)picolinato]-κ(3) N,O (2):O (5);κ(3) O (5):N,O (2)-[di-aqua-cobalt(II)]-μ-1-[4-(1H-imidazol-1-yl)phen-yl]-1H-imidazole-κ(2) N (3):N (3')].

Guo-Wang Xu1, Ye-Nan Wang2, Hai-Bing Wang2, Zhong-Long Wang1.   

Abstract

The asymmetric unit of the title polymeric Co(II) complex, [Co2(C13H7NO4)2(C12H10N4)(H2O)4] n , contains a Co(II) cation, a 5-(4-carboxyl-atophen-yl)picolinate dianion, two coordination water mol-ecules and half of 1-[4-(1H-imidazol-1-yl)phen-yl]-1H-imidazole ligand. The Co(II) cation is coordinated by two picolinate dianions, two water mol-ecules and one 1-[4-(1H-imidazol-1-yl)phen-yl]-1H-imidazole mol-ecule in a distorted N2O4 octa-hedral coordination geometry. The two picolinate dianions are related by an inversion centre and link two Co(II) cations, forming a binuclear unit, which is further bridged by the imidazole mol-ecules, located about an inversion centre, into the polymeric chain propagating along the [-1-11] direction. In the crystal, the three-dimensional supra-molecular architecture is constructed by O-H⋯O hydrogen bonds between the coordinating water mol-ecules and the non-coordinating carboxyl-ate O atoms of adjacent polymeric chains.

Entities:  

Keywords:  1-[4-(1H-imidazol-1-yl)phen­yl]-1H-imidazole; 5-(4-carb­oxy­phen­yl)picolinate; cobalt(II) complex; crystal structure; one-dimensional coordination polymer

Year:  2015        PMID: 26279894      PMCID: PMC4518948          DOI: 10.1107/S2056989015012190

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the structure of a related 5-(4-carb­oxy­phen­yl)picolinate complex, see: Meng et al. (2012 ▸). For a related 1,4-bis­(1-imidazoly)benzene compound, see: Li et al. (2009 ▸).

Experimental

Crystal data

[Co2(C13H7NO4)2(C12H10N4)(H2O)4] M = 441.28 Triclinic, a = 7.055 (3) Å b = 7.190 (3) Å c = 20.038 (10) Å α = 80.25 (2)° β = 79.90 (2)° γ = 64.080 (15)° V = 895.1 (7) Å3 Z = 2 Mo Kα radiation μ = 1.00 mm−1 T = 293 K 0.20 × 0.20 × 0.17 mm

Data collection

Bruker SMART 1000 CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▸) T min = 0.825, T max = 0.848 9552 measured reflections 4104 independent reflections 3636 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.090 S = 1.05 4104 reflections 274 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.34 e Å−3 Δρmin = −0.41 e Å−3

Data collection: SMART (Bruker, 2007 ▸); cell refinement: SAINT (Bruker, 2007 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▸); molecular graphics: SHELXTL (Sheldrick, 2008 ▸); software used to prepare material for publication: publCIF (Westrip, 2010 ▸). Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S2056989015012190/xu5853sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015012190/xu5853Isup2.hkl Click here for additional data file. x z x y z . DOI: 10.1107/S2056989015012190/xu5853fig1.tif A part of the crystal structure of the title compound with labelling and displacement ellipsoids drawn at the 30% probability level. Symmetry codes: (i) −x, 1 − y, 1 − z; (ii) 1 − x, 2 − y, −z. CCDC reference: 1062328 Additional supporting information: crystallographic information; 3D view; checkCIF report
[Co2(C13H7NO4)2(C12H10N4)(H2O)4]Z = 2
Mr = 441.28F(000) = 452
Triclinic, P1Dx = 1.637 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.055 (3) ÅCell parameters from 2498 reflections
b = 7.190 (3) Åθ = 2.1–27.6°
c = 20.038 (10) ŵ = 1.00 mm1
α = 80.25 (2)°T = 293 K
β = 79.90 (2)°Prism, red
γ = 64.080 (15)°0.20 × 0.20 × 0.17 mm
V = 895.1 (7) Å3
Bruker SMART 1000 CCD diffractometer4104 independent reflections
Radiation source: fine-focus sealed tube3636 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.045
phi and ω scansθmax = 27.6°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −9→9
Tmin = 0.825, Tmax = 0.848k = −9→9
9552 measured reflectionsl = −26→25
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.090H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.035P)2 + 0.341P] where P = (Fo2 + 2Fc2)/3
4104 reflections(Δ/σ)max = 0.001
274 parametersΔρmax = 0.34 e Å3
4 restraintsΔρmin = −0.41 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co1−0.00343 (4)0.48246 (4)0.218107 (13)0.02287 (10)
N10.1553 (3)0.6510 (3)0.69865 (8)0.0240 (4)
N20.1229 (3)0.5882 (3)0.12579 (9)0.0286 (4)
N30.2772 (3)0.7531 (3)0.04950 (8)0.0291 (4)
O10.2958 (3)0.7975 (3)0.25034 (8)0.0359 (4)
O20.1274 (3)0.5901 (3)0.28498 (8)0.0368 (4)
O30.3160 (3)0.8566 (2)0.81611 (8)0.0325 (3)
O40.1426 (3)0.6548 (3)0.83101 (7)0.0341 (4)
O5−0.2808 (3)0.7538 (3)0.22533 (10)0.0404 (4)
O60.2678 (3)0.2026 (3)0.22547 (11)0.0443 (4)
C10.2182 (3)0.6971 (3)0.29511 (10)0.0247 (4)
C20.2347 (3)0.7058 (3)0.36903 (10)0.0242 (4)
C30.2170 (3)0.5541 (3)0.41956 (11)0.0279 (4)
H30.19910.44360.40780.033*
C40.2260 (3)0.5653 (3)0.48755 (11)0.0286 (4)
H40.21900.45960.52040.034*
C50.2452 (3)0.7331 (3)0.50710 (10)0.0248 (4)
C60.2625 (4)0.8848 (3)0.45621 (11)0.0294 (5)
H60.27480.99830.46810.035*
C70.2618 (3)0.8700 (3)0.38789 (11)0.0287 (4)
H70.27940.97010.35460.034*
C80.2451 (3)0.7502 (3)0.58043 (10)0.0253 (4)
C90.1620 (3)0.6403 (3)0.63224 (10)0.0270 (4)
H90.10850.55520.61980.032*
C100.2369 (3)0.7693 (3)0.71770 (10)0.0246 (4)
C110.3202 (4)0.8855 (4)0.67012 (11)0.0330 (5)
H110.37400.96810.68400.040*
C120.3220 (4)0.8769 (4)0.60140 (11)0.0329 (5)
H120.37520.95630.56900.039*
C130.2319 (3)0.7604 (3)0.79457 (10)0.0246 (4)
C140.2106 (4)0.7192 (4)0.11613 (11)0.0341 (5)
H140.22540.78130.15080.041*
C150.2261 (4)0.6350 (4)0.01419 (11)0.0346 (5)
H150.25070.6269−0.03260.042*
C160.1328 (4)0.5334 (4)0.06182 (11)0.0332 (5)
H160.08300.44090.05290.040*
C170.5370 (4)0.8784 (4)0.06193 (11)0.0373 (6)
H170.56150.79600.10340.045*
C180.3908 (4)0.8791 (3)0.02369 (10)0.0286 (5)
C190.3533 (4)0.9994 (4)−0.03836 (11)0.0346 (5)
H190.25570.9982−0.06390.042*
H5A−0.288 (5)0.869 (2)0.2128 (14)0.052*
H5B−0.403 (2)0.767 (5)0.2352 (15)0.052*
H6A0.383 (3)0.191 (5)0.2064 (14)0.052*
H6B0.263 (5)0.090 (2)0.2309 (15)0.052*
U11U22U33U12U13U23
Co10.02701 (16)0.02627 (15)0.02110 (15)−0.01781 (12)−0.00122 (10)−0.00029 (10)
N10.0276 (9)0.0289 (9)0.0216 (8)−0.0184 (8)−0.0011 (7)−0.0018 (7)
N20.0365 (10)0.0367 (10)0.0220 (9)−0.0261 (9)−0.0009 (7)0.0002 (7)
N30.0420 (11)0.0399 (10)0.0188 (8)−0.0316 (9)0.0007 (7)−0.0013 (7)
O10.0512 (10)0.0455 (9)0.0246 (8)−0.0345 (9)−0.0010 (7)−0.0021 (7)
O20.0505 (10)0.0487 (10)0.0291 (8)−0.0366 (9)−0.0077 (7)−0.0026 (7)
O30.0429 (9)0.0393 (9)0.0288 (8)−0.0294 (8)−0.0038 (7)−0.0044 (7)
O40.0496 (10)0.0474 (9)0.0220 (7)−0.0378 (9)−0.0002 (6)−0.0017 (7)
O50.0300 (9)0.0252 (8)0.0647 (12)−0.0139 (8)−0.0014 (8)0.0008 (8)
O60.0285 (9)0.0289 (8)0.0732 (13)−0.0152 (8)0.0035 (8)0.0000 (9)
C10.0246 (10)0.0273 (10)0.0256 (10)−0.0140 (9)−0.0030 (8)−0.0031 (8)
C20.0218 (10)0.0308 (10)0.0231 (10)−0.0139 (9)−0.0022 (7)−0.0036 (8)
C30.0294 (11)0.0306 (11)0.0298 (11)−0.0180 (9)−0.0027 (8)−0.0042 (9)
C40.0338 (12)0.0310 (11)0.0267 (11)−0.0205 (10)−0.0026 (8)0.0007 (8)
C50.0228 (10)0.0323 (10)0.0235 (10)−0.0158 (9)−0.0010 (8)−0.0031 (8)
C60.0390 (12)0.0331 (11)0.0270 (10)−0.0250 (10)−0.0037 (9)−0.0035 (9)
C70.0374 (12)0.0313 (11)0.0240 (10)−0.0217 (10)−0.0047 (8)0.0016 (8)
C80.0256 (10)0.0323 (10)0.0216 (10)−0.0163 (9)−0.0009 (8)−0.0022 (8)
C90.0314 (11)0.0331 (11)0.0251 (10)−0.0213 (9)−0.0039 (8)−0.0026 (8)
C100.0253 (10)0.0283 (10)0.0256 (10)−0.0167 (9)−0.0009 (8)−0.0035 (8)
C110.0445 (13)0.0420 (12)0.0279 (11)−0.0331 (11)−0.0004 (9)−0.0050 (9)
C120.0442 (14)0.0445 (13)0.0229 (10)−0.0332 (12)−0.0005 (9)0.0007 (9)
C130.0271 (11)0.0272 (10)0.0236 (10)−0.0156 (9)−0.0018 (8)−0.0028 (8)
C140.0519 (14)0.0485 (13)0.0187 (10)−0.0381 (12)0.0015 (9)−0.0040 (9)
C150.0461 (14)0.0486 (13)0.0215 (10)−0.0322 (12)0.0015 (9)−0.0066 (9)
C160.0468 (14)0.0405 (12)0.0271 (11)−0.0323 (11)−0.0012 (9)−0.0055 (9)
C170.0531 (15)0.0522 (14)0.0211 (10)−0.0385 (13)−0.0090 (10)0.0098 (10)
C180.0404 (13)0.0369 (12)0.0189 (9)−0.0283 (10)0.0020 (8)−0.0014 (8)
C190.0433 (13)0.0516 (14)0.0233 (10)−0.0339 (12)−0.0081 (9)0.0032 (9)
Co1—N1i2.1403 (18)C3—H30.9300
Co1—N22.0815 (18)C4—C51.396 (3)
Co1—O22.1575 (16)C4—H40.9300
Co1—O4i2.1028 (16)C5—C61.393 (3)
Co1—O52.0773 (18)C5—C81.495 (3)
Co1—O62.0889 (19)C6—C71.392 (3)
N1—C91.338 (3)C6—H60.9300
N1—C101.347 (2)C7—H70.9300
N1—Co1i2.1403 (18)C8—C121.394 (3)
N2—C141.309 (3)C8—C91.400 (3)
N2—C161.385 (3)C9—H90.9300
N3—C141.354 (3)C10—C111.384 (3)
N3—C151.383 (3)C10—C131.526 (3)
N3—C181.435 (3)C11—C121.386 (3)
O1—C11.257 (2)C11—H110.9300
O2—C11.254 (2)C12—H120.9300
O3—C131.251 (2)C14—H140.9300
O4—C131.255 (2)C15—C161.357 (3)
O4—Co1i2.1028 (16)C15—H150.9300
O5—H5A0.810 (10)C16—H160.9300
O5—H5B0.813 (10)C17—C19ii1.386 (3)
O6—H6A0.811 (10)C17—C181.387 (3)
O6—H6B0.814 (10)C17—H170.9300
C1—C21.520 (3)C18—C191.384 (3)
C2—C31.390 (3)C19—C17ii1.386 (3)
C2—C71.395 (3)C19—H190.9300
C3—C41.392 (3)
O5—Co1—N294.70 (8)C6—C5—C8121.13 (18)
O5—Co1—O6172.08 (8)C4—C5—C8120.96 (18)
N2—Co1—O692.55 (8)C7—C6—C5121.32 (19)
O5—Co1—O4i92.29 (8)C7—C6—H6119.3
N2—Co1—O4i92.21 (7)C5—C6—H6119.3
O6—Co1—O4i90.60 (8)C6—C7—C2120.39 (19)
O5—Co1—N1i86.11 (8)C6—C7—H7119.8
N2—Co1—N1i169.23 (7)C2—C7—H7119.8
O6—Co1—N1i87.36 (8)C12—C8—C9116.25 (18)
O4i—Co1—N1i77.02 (7)C12—C8—C5122.94 (18)
O5—Co1—O289.39 (8)C9—C8—C5120.80 (18)
N2—Co1—O297.93 (7)N1—C9—C8123.55 (18)
O6—Co1—O286.46 (8)N1—C9—H9118.2
O4i—Co1—O2169.55 (6)C8—C9—H9118.2
N1i—Co1—O292.81 (7)N1—C10—C11121.47 (19)
C9—N1—C10119.08 (17)N1—C10—C13114.58 (17)
C9—N1—Co1i126.97 (14)C11—C10—C13123.95 (18)
C10—N1—Co1i113.75 (13)C10—C11—C12118.96 (19)
C14—N2—C16105.69 (17)C10—C11—H11120.5
C14—N2—Co1127.21 (15)C12—C11—H11120.5
C16—N2—Co1127.09 (14)C11—C12—C8120.62 (19)
C14—N3—C15106.92 (17)C11—C12—H12119.7
C14—N3—C18124.58 (18)C8—C12—H12119.7
C15—N3—C18128.39 (17)O3—C13—O4125.53 (19)
C1—O2—Co1151.15 (14)O3—C13—C10118.33 (17)
C13—O4—Co1i117.89 (13)O4—C13—C10116.14 (17)
Co1—O5—H5A124 (2)N2—C14—N3111.75 (19)
Co1—O5—H5B129 (2)N2—C14—H14124.1
H5A—O5—H5B106 (3)N3—C14—H14124.1
Co1—O6—H6A122 (2)C16—C15—N3105.86 (19)
Co1—O6—H6B123 (2)C16—C15—H15127.1
H6A—O6—H6B109 (3)N3—C15—H15127.1
O2—C1—O1126.48 (19)C15—C16—N2109.77 (19)
O2—C1—C2116.35 (18)C15—C16—H16125.1
O1—C1—C2117.17 (17)N2—C16—H16125.1
C3—C2—C7118.53 (18)C19ii—C17—C18120.0 (2)
C3—C2—C1120.86 (18)C19ii—C17—H17120.0
C7—C2—C1120.59 (18)C18—C17—H17120.0
C2—C3—C4120.86 (19)C19—C18—C17120.91 (19)
C2—C3—H3119.6C19—C18—N3120.09 (19)
C4—C3—H3119.6C17—C18—N3118.99 (19)
C3—C4—C5120.90 (19)C18—C19—C17ii119.1 (2)
C3—C4—H4119.6C18—C19—H19120.4
C5—C4—H4119.6C17ii—C19—H19120.4
C6—C5—C4117.91 (19)
O5—Co1—N2—C1476.7 (2)Co1i—N1—C9—C8172.91 (15)
O6—Co1—N2—C14−100.1 (2)C12—C8—C9—N1−0.4 (3)
O4i—Co1—N2—C14169.2 (2)C5—C8—C9—N1−179.25 (19)
N1i—Co1—N2—C14170.6 (3)C9—N1—C10—C112.4 (3)
O2—Co1—N2—C14−13.3 (2)Co1i—N1—C10—C11−172.91 (17)
O5—Co1—N2—C16−103.7 (2)C9—N1—C10—C13−176.73 (18)
O6—Co1—N2—C1679.4 (2)Co1i—N1—C10—C138.0 (2)
O4i—Co1—N2—C16−11.3 (2)N1—C10—C11—C12−1.0 (3)
N1i—Co1—N2—C16−9.9 (5)C13—C10—C11—C12178.0 (2)
O2—Co1—N2—C16166.21 (19)C10—C11—C12—C8−1.2 (4)
O5—Co1—O2—C1−82.1 (3)C9—C8—C12—C111.9 (3)
N2—Co1—O2—C112.6 (3)C5—C8—C12—C11−179.4 (2)
O6—Co1—O2—C1104.7 (3)Co1i—O4—C13—O3177.72 (17)
O4i—Co1—O2—C1178.5 (3)Co1i—O4—C13—C10−2.5 (2)
N1i—Co1—O2—C1−168.2 (3)N1—C10—C13—O3175.91 (18)
Co1—O2—C1—O1−7.1 (5)C11—C10—C13—O3−3.2 (3)
Co1—O2—C1—C2172.7 (2)N1—C10—C13—O4−3.9 (3)
O2—C1—C2—C320.7 (3)C11—C10—C13—O4177.0 (2)
O1—C1—C2—C3−159.4 (2)C16—N2—C14—N30.0 (3)
O2—C1—C2—C7−157.4 (2)Co1—N2—C14—N3179.63 (15)
O1—C1—C2—C722.4 (3)C15—N3—C14—N20.4 (3)
C7—C2—C3—C40.1 (3)C18—N3—C14—N2−176.1 (2)
C1—C2—C3—C4−178.12 (19)C14—N3—C15—C16−0.7 (3)
C2—C3—C4—C52.3 (3)C18—N3—C15—C16175.6 (2)
C3—C4—C5—C6−2.2 (3)N3—C15—C16—N20.7 (3)
C3—C4—C5—C8177.2 (2)C14—N2—C16—C15−0.5 (3)
C4—C5—C6—C7−0.3 (3)Co1—N2—C16—C15179.93 (16)
C8—C5—C6—C7−179.7 (2)C19ii—C17—C18—C190.5 (4)
C5—C6—C7—C22.7 (3)C19ii—C17—C18—N3−179.3 (2)
C3—C2—C7—C6−2.5 (3)C14—N3—C18—C19−143.7 (2)
C1—C2—C7—C6175.7 (2)C15—N3—C18—C1940.6 (4)
C6—C5—C8—C12−19.3 (3)C14—N3—C18—C1736.1 (3)
C4—C5—C8—C12161.3 (2)C15—N3—C18—C17−139.6 (3)
C6—C5—C8—C9159.4 (2)C17—C18—C19—C17ii−0.5 (4)
C4—C5—C8—C9−19.9 (3)N3—C18—C19—C17ii179.3 (2)
C10—N1—C9—C8−1.7 (3)
D—H···AD—HH···AD···AD—H···A
O5—H5A···O3iii0.81 (2)1.89 (2)2.697 (3)178 (4)
O5—H5B···O1iv0.82 (2)2.01 (2)2.825 (4)175 (3)
O6—H6A···O3v0.81 (3)1.98 (3)2.769 (3)165 (3)
O6—H6B···O1vi0.81 (2)1.99 (2)2.795 (3)171 (3)
Table 1

Selected bond lengths ()

Co1N1i 2.1403(18)
Co1N22.0815(18)
Co1O22.1575(16)
Co1O4i 2.1028(16)
Co1O52.0773(18)
Co1O62.0889(19)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
O5H5AO3ii 0.81(2)1.89(2)2.697(3)178(4)
O5H5BO1iii 0.82(2)2.01(2)2.825(4)175(3)
O6H6AO3iv 0.81(3)1.98(3)2.769(3)165(3)
O6H6BO1v 0.81(2)1.99(2)2.795(3)171(3)

Symmetry codes: (ii) ; (iii) ; (iv) ; (v) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Poly[di-μ(3)-hy-droxy[μ(4)-5-(4-carb-oxy-phen-yl)pyridine-2-carboxyl-ato-κ(5)N,O(2):O(2'):O(4):O(4')]dicadmium].

Authors:  Fan-Jin Meng; Heng-Qing Jia; Ning-Hai Hu; Hua Zhou
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-13
  2 in total

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