Literature DB >> 26277488

Prediction of dual agents as an activator of mutant p53 and inhibitor of Hsp90 by docking, molecular dynamic simulation and virtual screening.

Maryam Abbasi1, Hojjat Sadeghi-Aliabadi2, Farshid Hassanzadeh3, Massoud Amanlou4.   

Abstract

Heat shock protein90s (Hsp90s) play a crucial role in the development of cancer, and their inhibitors are a main target for tumor suppression. P53 also is a tumor suppressor, but in cancer cells, mutations in the p53 gene lead to the inactivation and accumulation of protein. For instance, the ninth p53 cancer mutation, Y220C, destabilizes the p53 core domain. Small molecules have been assumed to bind to Y220C DNA-binding domain and reactivate cellular mutant p53 functions. In this study, one of the mutant p53 activators is suggested as an Hsp90 inhibitor according to a pyrazole scaffold. To confirm a new ligand as a dual agent, molecular docking and molecular dynamic simulations were performed on both proteins (p53 and Hsp90). Molecular dynamic simulations were also conducted to evaluate the obtained results on the other two pyrazole structures, one known as Hsp90 inhibitor and the other as the reported mutant p53 activator. The findings indicate that the new ligand was stable in the active site of both proteins. Finally, a virtual screening was performed on ZINC database, and a set of new dual agents was proposed according to the new ligand scaffold.
Copyright © 2015. Published by Elsevier Inc.

Entities:  

Keywords:  Docking; Dual agent; Hsp90 inhibitors; Molecular dynamic simulations; P53; Virtual screening

Mesh:

Substances:

Year:  2015        PMID: 26277488     DOI: 10.1016/j.jmgm.2015.08.001

Source DB:  PubMed          Journal:  J Mol Graph Model        ISSN: 1093-3263            Impact factor:   2.518


  5 in total

Review 1.  Heat Shock Protein 90 (HSP90) Inhibitors as Anticancer Medicines: A Review on the Computer-Aided Drug Discovery Approaches over the Past Five Years.

Authors:  Ayanda M Magwenyane; Samuel C Ugbaja; Daniel G Amoako; Anou M Somboro; Rene B Khan; Hezekiel M Kumalo
Journal:  Comput Math Methods Med       Date:  2022-05-31       Impact factor: 2.809

2.  Prediction of new Hsp90 inhibitors based on 3,4-isoxazolediamide scaffold using QSAR study, molecular docking and molecular dynamic simulation.

Authors:  Maryam Abbasi; Hojjat Sadeghi-Aliabadi; Massoud Amanlou
Journal:  Daru       Date:  2017-06-30       Impact factor: 3.117

3.  Novel N-substituted indole hydrazones as potential antiplatelet agents: synthesis, biological evaluations, and molecular docking studies.

Authors:  Navid Tavili; Shaya Mokhtari; Hafezeh Salehabadi; Marjan Esfahanizadeh; Shohreh Mohebbi
Journal:  Res Pharm Sci       Date:  2021-11-11

4.  Identification of a Novel Class of BRD4 Inhibitors by Computational Screening and Binding Simulations.

Authors:  Bryce K Allen; Saurabh Mehta; Stuart W J Ember; Jin-Yi Zhu; Ernst Schönbrunn; Nagi G Ayad; Stephan C Schürer
Journal:  ACS Omega       Date:  2017-08-21

5.  Understanding the Molecular Basis of 5-HT4 Receptor Partial Agonists through 3D-QSAR Studies.

Authors:  Alejandro Castro-Alvarez; Emigdio Chávez-Ángel; Ronald Nelson
Journal:  Int J Mol Sci       Date:  2021-03-30       Impact factor: 5.923

  5 in total

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