Literature DB >> 26276479

RIDME Spectroscopy with Gd(III) Centers.

Sahand Razzaghi1, Mian Qi2, Anna I Nalepa3, Adelheid Godt2, Gunnar Jeschke1, Anton Savitsky3, Maxim Yulikov1.   

Abstract

The relaxation induced dipolar modulation enhancement (RIDME) technique is applied at W-band microwave frequencies around 94 GHz to a pair of Gd(III) complexes that are connected by a rodlike spacer, and the extraction of the interspin distance distribution is discussed. A dipolar pattern derived from RIDME experimental data is a superposition of Pake-like dipolar patterns corresponding to the fundamental dipolar interaction and higher harmonics thereof. Intriguingly, the relative weights of the stretched patterns do not depend significantly on mixing time. As much larger modulation depths can be achieved than in double electron-electron resonance distance measurements at the same frequency, Gd(III)-Gd(III) RIDME may become attractive for structural characterization of biomacromolecules and biomolecular complexes.

Keywords:  DEER; EPR; ESR; dipolar spectroscopy; distance measurements; lanthanide ions

Year:  2014        PMID: 26276479     DOI: 10.1021/jz502129t

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  9 in total

1.  Gd3+-Gd3+ distances exceeding 3 nm determined by very high frequency continuous wave electron paramagnetic resonance.

Authors:  Jessica A Clayton; Mian Qi; Adelheid Godt; Daniella Goldfarb; Songi Han; Mark S Sherwin
Journal:  Phys Chem Chem Phys       Date:  2017-02-15       Impact factor: 3.676

2.  Structure of the human Ccr4-Not nuclease module using X-ray crystallography and electron paramagnetic resonance spectroscopy distance measurements.

Authors:  Qionglin Zhang; Lorenzo Pavanello; Alexey Potapov; Mark Bartlam; Gerlof Sebastiaan Winkler
Journal:  Protein Sci       Date:  2022-01-07       Impact factor: 6.725

3.  Deep neural network processing of DEER data.

Authors:  Steven G Worswick; James A Spencer; Gunnar Jeschke; Ilya Kuprov
Journal:  Sci Adv       Date:  2018-08-24       Impact factor: 14.136

4.  Gd(III)-Gd(III) Relaxation-Induced Dipolar Modulation Enhancement for In-Cell Electron Paramagnetic Resonance Distance Determination.

Authors:  Mykhailo Azarkh; Anna Bieber; Mian Qi; Jörg W A Fischer; Maxim Yulikov; Adelheid Godt; Malte Drescher
Journal:  J Phys Chem Lett       Date:  2019-03-18       Impact factor: 6.475

5.  In situ observation of conformational dynamics and protein ligand-substrate interactions in outer-membrane proteins with DEER/PELDOR spectroscopy.

Authors:  Benesh Joseph; Eva A Jaumann; Arthur Sikora; Katja Barth; Thomas F Prisner; David S Cafiso
Journal:  Nat Protoc       Date:  2019-07-05       Impact factor: 13.491

6.  DEER and RIDME Measurements of the Nitroxide-Spin Labelled Copper-Bound Amine Oxidase Homodimer from Arthrobacter Globiformis.

Authors:  Hannah Russell; Rachel Stewart; Christopher Prior; Vasily S Oganesyan; Thembaninkosi G Gaule; Janet E Lovett
Journal:  Appl Magn Reson       Date:  2021-03-29       Impact factor: 0.831

7.  Pulse dipolar EPR for determining nanomolar binding affinities.

Authors:  Katrin Ackermann; Joshua L Wort; Bela E Bode
Journal:  Chem Commun (Camb)       Date:  2022-08-04       Impact factor: 6.065

8.  Monitoring Complex Formation by Relaxation-Induced Pulse Electron Paramagnetic Resonance Distance Measurements.

Authors:  Angeliki Giannoulis; Maria Oranges; Bela E Bode
Journal:  Chemphyschem       Date:  2017-08-01       Impact factor: 3.102

9.  Pulsed EPR Dipolar Spectroscopy on Spin Pairs with one Highly Anisotropic Spin Center: The Low-Spin FeIII Case.

Authors:  Dinar Abdullin; Philipp Brehm; Nico Fleck; Sebastian Spicher; Stefan Grimme; Olav Schiemann
Journal:  Chemistry       Date:  2019-10-09       Impact factor: 5.236

  9 in total

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