Literature DB >> 26275458

Targeting disordered proteins with small molecules using entropy.

Gabriella T Heller1, Pietro Sormanni1, Michele Vendruscolo2.   

Abstract

The human proteome includes many disordered proteins. Although these proteins are closely linked with a range of human diseases, no clinically approved drug targets them in their monomeric forms. This situation arises, at least in part, from the current lack of understanding of the mechanisms by which small molecules bind proteins that do not fold into well-defined conformations. To explore possible solutions to this problem, we discuss quite generally how an overall decrease in the free energy associated with intermolecular binding can originate from different combinations of enthalpic and entropic contributions. We then consider more specifically a mechanism of binding by which small molecules can affect the conformational space of a disordered protein by creating an entropic expansion in which more conformations of the protein become populated.
Copyright © 2015. Published by Elsevier Ltd.

Entities:  

Keywords:  binding; disordered proteins; entropic expansion; entropy; small molecule

Mesh:

Substances:

Year:  2015        PMID: 26275458     DOI: 10.1016/j.tibs.2015.07.004

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  28 in total

1.  Concomitant disorder and high-affinity zinc binding in the human zinc- and iron-regulated transport protein 4 intracellular loop.

Authors:  Elizabeth M Bafaro; Mark W Maciejewski; Jeffrey C Hoch; Robert E Dempski
Journal:  Protein Sci       Date:  2019-03-12       Impact factor: 6.725

Review 2.  Dynamic Protein Interaction Networks and New Structural Paradigms in Signaling.

Authors:  Veronika Csizmok; Ariele Viacava Follis; Richard W Kriwacki; Julie D Forman-Kay
Journal:  Chem Rev       Date:  2016-02-29       Impact factor: 60.622

Review 3.  Protein phase separation: A novel therapy for cancer?

Authors:  Wei Wang; Yingqian Chen; Aixiao Xu; Minyi Cai; Ji Cao; Hong Zhu; Bo Yang; Xuejing Shao; Meidan Ying; Qiaojun He
Journal:  Br J Pharmacol       Date:  2020-09-28       Impact factor: 8.739

4.  Structures and Short Linear Motif of Disordered Transcription Factor Regions Provide Clues to the Interactome of the Cellular Hub Protein Radical-induced Cell Death1.

Authors:  Charlotte O'Shea; Lasse Staby; Sidsel Krogh Bendsen; Frederik Grønbæk Tidemand; Andreas Redsted; Martin Willemoës; Birthe B Kragelund; Karen Skriver
Journal:  J Biol Chem       Date:  2016-11-23       Impact factor: 5.157

5.  Thermodynamics of Conformational Transitions in a Disordered Protein Backbone Model.

Authors:  Justin A Drake; B Montgomery Pettitt
Journal:  Biophys J       Date:  2018-06-19       Impact factor: 4.033

Review 6.  Drugging the 'undruggable' cancer targets.

Authors:  Chi V Dang; E Premkumar Reddy; Kevan M Shokat; Laura Soucek
Journal:  Nat Rev Cancer       Date:  2017-06-23       Impact factor: 60.716

7.  Affinity of disordered protein complexes is modulated by entropy-energy reinforcement.

Authors:  Milan Kumar Hazra; Yaakov Levy
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-21       Impact factor: 12.779

8.  A Small Molecule Causes a Population Shift in the Conformational Landscape of an Intrinsically Disordered Protein.

Authors:  David Ban; Luigi I Iconaru; Arvind Ramanathan; Jian Zuo; Richard W Kriwacki
Journal:  J Am Chem Soc       Date:  2017-09-21       Impact factor: 15.419

9.  EPI-001, A Compound Active against Castration-Resistant Prostate Cancer, Targets Transactivation Unit 5 of the Androgen Receptor.

Authors:  Eva De Mol; R Bryn Fenwick; Christopher T W Phang; Victor Buzón; Elzbieta Szulc; Alex de la Fuente; Albert Escobedo; Jesús García; Carlos W Bertoncini; Eva Estébanez-Perpiñá; Iain J McEwan; Antoni Riera; Xavier Salvatella
Journal:  ACS Chem Biol       Date:  2016-07-14       Impact factor: 5.100

10.  On the specificity of protein-protein interactions in the context of disorder.

Authors:  Kaare Teilum; Johan G Olsen; Birthe B Kragelund
Journal:  Biochem J       Date:  2021-06-11       Impact factor: 3.857

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.