Literature DB >> 26273842

HPLC Measurement of the DNA Oxidation Biomarker, 8-oxo-7,8-dihydro-2'-deoxyguanosine, in Cultured Cells and Animal Tissues.

Nikolai L Chepelev1, Dean A Kennedy2, Remi Gagné2, Taryn White2, Alexandra S Long2, Carole L Yauk2, Paul A White2.   

Abstract

Oxidative stress is associated with many physiological and pathological processes, as well as xenobiotic metabolism, leading to the oxidation of biomacromolecules, including DNA. Therefore, efficient detection of DNA oxidation is important for a variety of research disciplines, including medicine and toxicology. A common biomarker of oxidatively damaged DNA is 8-oxo-7,8-dihydro-2'-deoxyguanosine (8-oxo-dGuo; often erroneously referred to as 8-hydroxy-2'-deoxyguanosine (8-OH-dGuo or 8-oxo-dG)). Several protocols for 8-oxo-dGuo measurement by high pressure liquid chromatography with electrochemical detection (HPLC-ED) have been described. However, these were mainly applied to purified DNA treated with pro-oxidants. In addition, due to methodological differences between laboratories, mainly due to differences in analytical equipment, the adoption of published methods for detection of 8-oxo-dGuo by HPLC-ED requires careful optimization by each laboratory. A comprehensive protocol, describing such an optimization process, is lacking. Here, a detailed protocol is described for the detection of 8-oxo-dGuo by HPLC-ED, in DNA from cultured cells or animal tissues. It illustrates how DNA sample preparation can be easily and rapidly optimized to minimize undesirable DNA oxidation that can occur during sample preparation. This protocol shows how to detect 8-oxo-dGuo in cultured human alveolar adenocarcinoma cells (i.e., A549 cells) treated with the oxidizing agent KBrO3, and from the spleen of mice exposed to the polycyclic aromatic hydrocarbon dibenzo(def,p)chrysene (DBC, formerly known as dibenzo(a,l)pyrene, DalP). Overall, this work illustrates how an HPLC-ED methodology can be readily optimized for the detection of 8-oxo-dGuo in biological samples.

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Year:  2015        PMID: 26273842      PMCID: PMC4544582          DOI: 10.3791/52697

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  24 in total

1.  Recommendations for standardized description of and nomenclature concerning oxidatively damaged nucleobases in DNA.

Authors:  Marcus S Cooke; Steffen Loft; Ryszard Olinski; Mark D Evans; Karol Bialkowski; J Richard Wagner; Peter C Dedon; Peter Møller; Marc M Greenberg; Jean Cadet
Journal:  Chem Res Toxicol       Date:  2010-04-19       Impact factor: 3.739

2.  Determination of new types of DNA lesions in human sperm.

Authors:  C Badouard; Y Ménézo; G Panteix; J L Ravanat; T Douki; J Cadet; A Favier
Journal:  Zygote       Date:  2008-02       Impact factor: 1.442

Review 3.  Measurement of oxidatively generated base damage in cellular DNA.

Authors:  Jean Cadet; Thierry Douki; Jean-Luc Ravanat
Journal:  Mutat Res       Date:  2011-02-15       Impact factor: 2.433

4.  Cellular background level of 8-oxo-7,8-dihydro-2'-deoxyguanosine: an isotope based method to evaluate artefactual oxidation of DNA during its extraction and subsequent work-up.

Authors:  Jean-Luc Ravanat; Thierry Douki; Pierre Duez; Eric Gremaud; Karl Herbert; Tim Hofer; Lydie Lasserre; Christine Saint-Pierre; Alain Favier; Jean Cadet
Journal:  Carcinogenesis       Date:  2002-11       Impact factor: 4.944

5.  Oxidative DNA damage is associated with intense noise exposure in the rat.

Authors:  Luann E Van Campen; William J Murphy; John R Franks; Patricia I Mathias; Mark A Toraason
Journal:  Hear Res       Date:  2002-02       Impact factor: 3.208

Review 6.  Polymorphic variation in hOGG1 and risk of cancer: a review of the functional and epidemiologic literature.

Authors:  J M Weiss; E L Goode; W C Ladiges; Cornelia M Ulrich
Journal:  Mol Carcinog       Date:  2005-03       Impact factor: 4.784

7.  First principles calculations of the tautomers and pK(a) values of 8-oxoguanine: implications for mutagenicity and repair.

Authors:  Yun Hee Jang; William A Goddard; Katherine T Noyes; Lawrence C Sowers; Sungu Hwang; Doo Soo Chung
Journal:  Chem Res Toxicol       Date:  2002-08       Impact factor: 3.739

8.  Development of an HPLC method with electrochemical detection of femtomoles of 8-oxo-7,8-dihydroguanine and 8-oxo-7,8-dihydro-2'-deoxyguanosine in the presence of uric acid.

Authors:  Isabel A Rebelo; José António P Piedade; Ana Maria Oliveira-Brett
Journal:  Talanta       Date:  2004-05-28       Impact factor: 6.057

Review 9.  Are we sure we know how to measure 8-oxo-7,8-dihydroguanine in DNA from human cells?

Authors:  Andrew R Collins; Jean Cadet; Lennart Möller; Henrik E Poulsen; Jose Viña
Journal:  Arch Biochem Biophys       Date:  2004-03-01       Impact factor: 4.013

10.  Analysis of 7,8-dihydro-8-oxo-2'-deoxyguanosine in cellular DNA during oxidative stress.

Authors:  Dipti Mangal; Daljit Vudathala; Jong-Heum Park; Seon Hwa Lee; Trevor M Penning; Ian A Blair
Journal:  Chem Res Toxicol       Date:  2009-05       Impact factor: 3.739

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  4 in total

1.  Carnosic Acid, a Natural Diterpene, Attenuates Arsenic-Induced Hepatotoxicity via Reducing Oxidative Stress, MAPK Activation, and Apoptotic Cell Death Pathway.

Authors:  Sonjit Das; Swarnalata Joardar; Prasenjit Manna; Tarun K Dua; Niloy Bhattacharjee; Ritu Khanra; Shovonlal Bhowmick; Jatin Kalita; Achintya Saha; Supratim Ray; Vincenzo De Feo; Saikat Dewanjee
Journal:  Oxid Med Cell Longev       Date:  2018-05-02       Impact factor: 6.543

Review 2.  8-oxoguanine and 8-oxodeoxyguanosine Biomarkers of Oxidative DNA Damage: A Review on HPLC-ECD Determination.

Authors:  Ana-Maria Chiorcea-Paquim
Journal:  Molecules       Date:  2022-03-01       Impact factor: 4.411

3.  AOP report: Development of an adverse outcome pathway for oxidative DNA damage leading to mutations and chromosomal aberrations.

Authors:  Eunnara Cho; Ashley Allemang; Marc Audebert; Vinita Chauhan; Stephen Dertinger; Giel Hendriks; Mirjam Luijten; Francesco Marchetti; Sheroy Minocherhomji; Stefan Pfuhler; Daniel J Roberts; Kristina Trenz; Carole L Yauk
Journal:  Environ Mol Mutagen       Date:  2022-05-03       Impact factor: 3.579

Review 4.  The Effect of β-Carotene, Tocopherols and Ascorbic Acid as Anti-Oxidant Molecules on Human and Animal In Vitro/In Vivo Studies: A Review of Research Design and Analytical Techniques Used.

Authors:  Krystian Miazek; Karolina Beton; Agnieszka Śliwińska; Beata Brożek-Płuska
Journal:  Biomolecules       Date:  2022-08-07
  4 in total

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