Literature DB >> 26270173

Common File Formats.

Lauren Mills1.   

Abstract

An overview of the many file formats commonly used in bioinformatics and genome sequence analysis is presented, including various data file formats, alignment file formats, and annotation file formats. Example workflows illustrate how some of the different file types are typically used.
Copyright © 2014 John Wiley & Sons, Inc.

Keywords:  bioinformatics; file formats; genomics

Mesh：

Year:  2014        PMID： 26270173     DOI： 10.1002/0471250953.bia01bs45

Source DB:  PubMed          Journal:  Curr Protoc Bioinformatics        ISSN： 1934-3396


  5 in total

1.  Protein Structure and Function Prediction Using I-TASSER.

Authors:  Jianyi Yang; Yang Zhang
Journal:  Curr Protoc Bioinformatics       Date:  2015-12-17

2.  Heterogeneity of transposon expression and activation of the repressive network in human fetal germ cells.

Authors:  Boris Reznik; Steven A Cincotta; Rebecca G Jaszczak; Leslie J Mateo; Joel Shen; Mei Cao; Laurence Baskin; Ping Ye; Wenfeng An; Diana J Laird
Journal:  Development       Date:  2019-02-01       Impact factor: 6.868

3.  TextFormats: Simplifying the definition and parsing of text formats in bioinformatics.

Authors:  Giorgio Gonnella
Journal:  PLoS One       Date:  2022-05-26       Impact factor: 3.752

4.  Chest imaging representing a COVID-19 positive rural U.S. population.

Authors:  Shivang Desai; Ahmad Baghal; Thidathip Wongsurawat; Piroon Jenjaroenpun; Thomas Powell; Shaymaa Al-Shukri; Kim Gates; Phillip Farmer; Michael Rutherford; Geri Blake; Tracy Nolan; Kevin Sexton; William Bennett; Kirk Smith; Shorabuddin Syed; Fred Prior
Journal:  Sci Data       Date:  2020-11-24       Impact factor: 6.444

5.  Maximum likelihood pandemic-scale phylogenetics.

Authors:  Nicola De Maio; Prabhav Kalaghatgi; Yatish Turakhia; Russell Corbett-Detig; Bui Quang Minh; Nick Goldman
Journal:  bioRxiv       Date:  2022-03-22
  5 in total

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