Literature DB >> 26269213

Energy landscape investigation by wavelet transform analysis of atomic force spectroscopy data in a biorecognition experiment.

Anna Rita Bizzarri1.   

Abstract

Force fluctuations recorded in an atomic force spectroscopy experiment, during the approach of a tip functionalized with biotin towards a substrate charged with avidin, have been analyzed by a wavelet transform. The observation of strong transient changes only when a specific biorecognition process between the partners takes place suggests a drastic modulation of the force fluctuations when biomolecules recognize each other. Such an analysis allows to investigate the peculiar features of a biorecognition process. These results are discussed in connection with the possible role of energy minima explored by biomolecules during the biorecognition process.

Entities:  

Keywords:  Atomic force spectroscopy; Biotin–avidin; PACS; Wavelet transform

Mesh:

Substances:

Year:  2015        PMID: 26269213      PMCID: PMC4713407          DOI: 10.1007/s10867-015-9398-8

Source DB:  PubMed          Journal:  J Biol Phys        ISSN: 0092-0606            Impact factor:   1.365


  26 in total

1.  Structural characterisation and functional significance of transient protein-protein interactions.

Authors:  Irene M A Nooren; Janet M Thornton
Journal:  J Mol Biol       Date:  2003-01-31       Impact factor: 5.469

2.  Intrinsic rates and activation free energies from single-molecule pulling experiments.

Authors:  Olga K Dudko; Gerhard Hummer; Attila Szabo
Journal:  Phys Rev Lett       Date:  2006-03-15       Impact factor: 9.161

3.  Energy landscape roughness of the streptavidin-biotin interaction.

Authors:  Félix Rico; Vincent T Moy
Journal:  J Mol Recognit       Date:  2007 Nov-Dec       Impact factor: 2.137

4.  The energy landscapes and motions of proteins.

Authors:  H Frauenfelder; S G Sligar; P G Wolynes
Journal:  Science       Date:  1991-12-13       Impact factor: 47.728

5.  Diagnosing heterogeneous dynamics in single-molecule/particle trajectories with multiscale wavelets.

Authors:  Kejia Chen; Bo Wang; Juan Guan; Steve Granick
Journal:  ACS Nano       Date:  2013-08-23       Impact factor: 15.881

6.  Scaling behaviour of heartbeat intervals obtained by wavelet-based time-series analysis.

Authors:  P C Ivanov; M G Rosenblum; C K Peng; J Mietus; S Havlin; H E Stanley; A L Goldberger
Journal:  Nature       Date:  1996-09-26       Impact factor: 49.962

7.  Wavelet analysis of human DNA.

Authors:  J A Tenreiro Machado; António C Costa; Maria Dulce Quelhas
Journal:  Genomics       Date:  2011-06-06       Impact factor: 5.736

8.  Interpreting the widespread nonlinear force spectra of intermolecular bonds.

Authors:  Raymond W Friddle; Aleksandr Noy; James J De Yoreo
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-06       Impact factor: 11.205

Review 9.  Models for the specific adhesion of cells to cells.

Authors:  G I Bell
Journal:  Science       Date:  1978-05-12       Impact factor: 47.728

Review 10.  Principles of protein-protein interactions.

Authors:  S Jones; J M Thornton
Journal:  Proc Natl Acad Sci U S A       Date:  1996-01-09       Impact factor: 11.205

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