Literature DB >> 26267866

Conformational stability of the RNP domain controls fibril formation of PABPN1.

Jens Liebold1, Reno Winter1, Ralph Golbik2, Gerd Hause3, Christoph Parthier4, Elisabeth Schwarz1.   

Abstract

The disease oculopharyngeal muscular dystrophy is caused by alanine codon trinucleotide expansions in the N-terminal segment of the nuclear poly(A) binding protein PABPN1. As histochemical features of the disease, intranuclear inclusions of PABPN1 have been reported. Whereas the purified N-terminal domain of PABPN1 forms fibrils in an alanine-dependent way, fibril formation of the full-length protein occurs also in the absence of alanines. Here, we addressed the question whether the stability of the RNP domain or domain swapping within the RNP domain may add to fibril formation. A variant of full-length PABPN1 with a stabilizing disulfide bond at position 185/201 in the RNP domain fibrillized in a redox-sensitive manner suggesting that the integrity of the RNP domain may contribute to fibril formation. Thermodynamic analysis of the isolated wild-type and the disulfide-linked RNP domain showed two state unfolding/refolding characteristics without detectable intermediates. Quantification of the thermodynamic stability of the mutant RNP domain pointed to an inverse correlation between fibril formation of full-length PABPN1 and the stability of the RNP domain.
© 2015 The Protein Society.

Entities:  

Keywords:  PABPN1; conformational stability; domain swapping; fibril formation; protein misfolding; thermodynamics

Mesh:

Substances:

Year:  2015        PMID: 26267866      PMCID: PMC4622212          DOI: 10.1002/pro.2769

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  39 in total

1.  Stabilization of partially folded conformation during alpha-synuclein oligomerization in both purified and cytosolic preparations.

Authors:  V N Uversky; H J Lee; J Li; A L Fink; S J Lee
Journal:  J Biol Chem       Date:  2001-11-23       Impact factor: 5.157

2.  Effect of oculopharyngeal muscular dystrophy-associated extension of seven alanines on the fibrillation properties of the N-terminal domain of PABPN1.

Authors:  Grit Lodderstedt; Simone Hess; Gerd Hause; Till Scheuermann; Thomas Scheibel; Elisabeth Schwarz
Journal:  FEBS J       Date:  2007-01       Impact factor: 5.542

3.  The two-stage pathway of ataxin-3 fibrillogenesis involves a polyglutamine-independent step.

Authors:  Andrew M Ellisdon; Bronwen Thomas; Stephen P Bottomley
Journal:  J Biol Chem       Date:  2006-04-19       Impact factor: 5.157

4.  Crystal structure and possible dimerization of the single RRM of human PABPN1.

Authors:  Honghua Ge; Dongwen Zhou; Shuilong Tong; Yongxiang Gao; Maikun Teng; Liwen Niu
Journal:  Proteins       Date:  2008-05-15

5.  Tyrosine, phenylalanine, and disulfide contributions to the circular dichroism of proteins: circular dichroism spectra of wild-type and mutant bovine pancreatic trypsin inhibitor.

Authors:  N Sreerama; M C Manning; M E Powers; J X Zhang; D P Goldenberg; R W Woody
Journal:  Biochemistry       Date:  1999-08-17       Impact factor: 3.162

Review 6.  3'-End processing of pre-mRNA in eukaryotes.

Authors:  E Wahle; U Rüegsegger
Journal:  FEMS Microbiol Rev       Date:  1999-06       Impact factor: 16.408

7.  Stereochemical modeling of disulfide bridges. Criteria for introduction into proteins by site-directed mutagenesis.

Authors:  R Sowdhamini; N Srinivasan; B Shoichet; D V Santi; C Ramakrishnan; P Balaram
Journal:  Protein Eng       Date:  1989-11

8.  Structural basis for RNA recognition by a type II poly(A)-binding protein.

Authors:  Jikui Song; Jered V McGivern; Karl W Nichols; John L Markley; Michael D Sheets
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-29       Impact factor: 11.205

9.  Mechanisms of ataxin-3 misfolding and fibril formation: kinetic analysis of a disease-associated polyglutamine protein.

Authors:  Andrew M Ellisdon; Mary C Pearce; Stephen P Bottomley
Journal:  J Mol Biol       Date:  2007-02-22       Impact factor: 5.469

10.  Purification and characterization of a mammalian polyadenylate polymerase involved in the 3' end processing of messenger RNA precursors.

Authors:  E Wahle
Journal:  J Biol Chem       Date:  1991-02-15       Impact factor: 5.157

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