Literature DB >> 26255382

A comparative study on network motif discovery algorithms.

Yusuf Kavurucu.   

Abstract

Subgraphs that occur in complex networks with significantly higher frequency than those in randomised networks are called network motifs. Such subgraphs often play important roles in the functioning of those networks. Finding network motifs is a computationally challenging problem. The main difficulties arise from the fact that real networks are large and the size of the search space grows exponentially with increasing network and motif size. Numerous methods have been developed to overcome these challenges. This paper provides a comparative study of the key network motif discovery algorithms in the literature and presents their algorithmic details on an example network.

Mesh:

Year:  2015        PMID: 26255382     DOI: 10.1504/ijdmb.2015.066777

Source DB:  PubMed          Journal:  Int J Data Min Bioinform        ISSN: 1748-5673            Impact factor:   0.667


  2 in total

Review 1.  A Guide to Conquer the Biological Network Era Using Graph Theory.

Authors:  Mikaela Koutrouli; Evangelos Karatzas; David Paez-Espino; Georgios A Pavlopoulos
Journal:  Front Bioeng Biotechnol       Date:  2020-01-31

Review 2.  Review of tools and algorithms for network motif discovery in biological networks.

Authors:  Sabyasachi Patra; Anjali Mohapatra
Journal:  IET Syst Biol       Date:  2020-08       Impact factor: 1.615

  2 in total

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