Literature DB >> 26253960

Draft genome sequence of Herbinix hemicellulosilytica T3/55 T, a new thermophilic cellulose degrading bacterium isolated from a thermophilic biogas reactor.

Daniela E Koeck1, Irena Maus2, Daniel Wibberg2, Anika Winkler2, Vladimir V Zverlov3, Wolfgang Liebl1, Alfred Pühler2, Wolfgang H Schwarz1, Andreas Schlüter4.   

Abstract

A novel bacterial species was isolated from an industrial-scale biogas plant. The isolate Herbinix hemicellulosilytica T3/55(T) is able to degrade crystalline cellulose. Comparative 16S rRNA gene sequencing demonstrated that the isolate is closely related to environmental samples forming a hitherto unknown sub-cluster within the family Lachnospiraceae. The draft genome sequence of strain T3/55(T) was established and now provides the genetic basis for application of this microorganism in thermophilic degradation of lignocellulosic biomass.
Copyright © 2015. Published by Elsevier B.V.

Entities:  

Keywords:  Anaerobic digestion; Biofuel; Biogas; Biogas plant; Cellulolytic

Mesh：

Substances：

Year:  2015        PMID： 26253960     DOI： 10.1016/j.jbiotec.2015.07.022

Source DB:  PubMed          Journal:  J Biotechnol        ISSN： 0168-1656            Impact factor:   3.307


  7 in total

1.  Deep metagenome and metatranscriptome analyses of microbial communities affiliated with an industrial biogas fermenter, a cow rumen, and elephant feces reveal major differences in carbohydrate hydrolysis strategies.

Authors:  Simon Güllert; Martin A Fischer; Dmitrij Turaev; Britta Noebauer; Nele Ilmberger; Bernd Wemheuer; Malik Alawi; Thomas Rattei; Rolf Daniel; Ruth A Schmitz; Adam Grundhoff; Wolfgang R Streit
Journal:  Biotechnol Biofuels       Date:  2016-06-07       Impact factor: 6.040

2.  Complete Genome Sequence of the Novel Cellulolytic, Anaerobic, Thermophilic Bacterium Herbivorax saccincola Type Strain GGR1, Isolated from a Lab Scale Biogas Reactor as Established by Illumina and Nanopore MinION Sequencing.

Authors:  Alexander Pechtl; Christian Rückert; Irena Maus; Daniela E Koeck; Nataliya Trushina; Petra Kornberger; Wolfgang H Schwarz; Andreas Schlüter; Wolfgang Liebl; Vladimir V Zverlov
Journal:  Genome Announc       Date:  2018-02-08

3.  Complete Genome Sequence of Herbinix luporum SD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor.

Authors:  Daniela E Koeck; Irena Maus; Daniel Wibberg; Anika Winkler; Vladimir V Zverlov; Wolfgang Liebl; Alfred Pühler; Wolfgang H Schwarz; Andreas Schlüter
Journal:  Genome Announc       Date:  2016-07-21

4.  Draft Genome Sequence of Propionispora sp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor.

Authors:  Daniela E Koeck; Irena Maus; Daniel Wibberg; Anika Winkler; Vladimir V Zverlov; Wolfgang Liebl; Alfred Pühler; Wolfgang H Schwarz; Andreas Schlüter
Journal:  Genome Announc       Date:  2016-06-23

5.  Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates.

Authors:  Irena Maus; Daniela E Koeck; Katharina G Cibis; Sarah Hahnke; Yong S Kim; Thomas Langer; Jana Kreubel; Marcel Erhard; Andreas Bremges; Sandra Off; Yvonne Stolze; Sebastian Jaenicke; Alexander Goesmann; Alexander Sczyrba; Paul Scherer; Helmut König; Wolfgang H Schwarz; Vladimir V Zverlov; Wolfgang Liebl; Alfred Pühler; Andreas Schlüter; Michael Klocke
Journal:  Biotechnol Biofuels       Date:  2016-08-11       Impact factor: 6.040

6.  Proteiniphilum saccharofermentans str. M3/6T isolated from a laboratory biogas reactor is versatile in polysaccharide and oligopeptide utilization as deduced from genome-based metabolic reconstructions.

Authors:  Geizecler Tomazetto; Sarah Hahnke; Daniel Wibberg; Alfred Pühler; Michael Klocke; Andreas Schlüter
Journal:  Biotechnol Rep (Amst)       Date:  2018-04-30

7.  Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes.

Authors:  Irena Maus; Andreas Bremges; Yvonne Stolze; Sarah Hahnke; Katharina G Cibis; Daniela E Koeck; Yong S Kim; Jana Kreubel; Julia Hassa; Daniel Wibberg; Aaron Weimann; Sandra Off; Robbin Stantscheff; Vladimir V Zverlov; Wolfgang H Schwarz; Helmut König; Wolfgang Liebl; Paul Scherer; Alice C McHardy; Alexander Sczyrba; Michael Klocke; Alfred Pühler; Andreas Schlüter
Journal:  Biotechnol Biofuels       Date:  2017-11-13       Impact factor: 6.040
  7 in total

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