Literature DB >> 26252979

One size does not fit all: the risk of using amplicon size of chloroplast SSR marker for genetic relationship studies.

Sun Woong Bang1, Sang-Min Chung2.   

Abstract

KEY MESSAGE: Even within closely related taxa, total length variation of PCR amplicons from chloroplast SSR must be confirmed by sequencing to avoid misinterpreting genetic relationships.

Mesh：

Substances：

Year:  2015        PMID： 26252979     DOI： 10.1007/s00299-015-1849-y

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN： 0721-7714            Impact factor:   4.570


  5 in total

1.  Genetic diversity of wild and cultivated grapevine accessions from southeast Turkey.

Authors:  Dilek Deǧirmenci Karataş; Hüseyin Karataş; Valérie Laucou; Gölge Sarikamiş; Leila Riahi; Roberto Bacilieri; Patrice This
Journal:  Hereditas       Date:  2014-10       Impact factor: 3.271

2.  Size homoplasy in chloroplast microsatellites of wild perennial relatives of soybean (Glycine subgenus Glycine)

Authors:  J J Doyle; M Morgante; S V Tingey; W Powell
Journal:  Mol Biol Evol       Date:  1998-02       Impact factor: 16.240

3.  Phylogeography of SW Mediterranean firs: different European origins for the North African Abies species.

Authors:  Jose M Sánchez-Robles; Francisco Balao; Anass Terrab; Juan L García-Castaño; María A Ortiz; Errol Vela; Salvador Talavera
Journal:  Mol Phylogenet Evol       Date:  2014-06-24       Impact factor: 4.286

4.  The development and evaluation of consensus chloroplast primer pairs that possess highly variable sequence regions in a diverse array of plant taxa.

Authors:  Sang-Min Chung; Jack E Staub
Journal:  Theor Appl Genet       Date:  2003-06-25       Impact factor: 5.699

Review 5.  A review of the prevalence, utility, and caveats of using chloroplast simple sequence repeats for studies of plant biology.

Authors:  Gregory L Wheeler; Hanna E Dorman; Alenda Buchanan; Lavanya Challagundla; Lisa E Wallace
Journal:  Appl Plant Sci       Date:  2014-11-20       Impact factor: 1.936
  5 in total

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