Literature DB >> 26249695

Crystallographic analysis of NosA, which catalyzes terminal amide formation in the biosynthesis of nosiheptide.

Yanting Wang1, Shanshan Liu2, Pengfei Yao2, Yi Yu2, Yan Zhang2, Wenxian Lan2, Chunxi Wang2, Jiuping Ding1, Wen Liu2, Chunyang Cao2.   

Abstract

Nosiheptide is a member of the thiopeptide family of antibiotics which demonstrates potent activities against various bacterial pathogens. The formation of its C-terminal amide is catalysed by NosA in an unusual strategy for maturating certain thiopeptides by processing precursor peptides featuring a serine extension. Here, a recombinant C-terminally truncated selenomethionine-derivatized NosA1-111 variant from Streptomyces actuosus consisting of residues 1-111, named SeMet NosA1-111, was crystallized using the sitting-drop vapour-diffusion method. Diffraction data were collected to 2.40 Å resolution using synchrotron radiation. The crystals belonged to the primitive cubic space group P4132, with unit-cell parameters a = b = c = 143.3 Å. Assuming the presence of three molecules in the asymmetric unit, the calculated Matthews coefficient was 3.94 Å(3) Da(-1) and the corresponding solvent content was 40.3%.

Entities:  

Keywords:  NosA; catalysis; crystallization; nosiheptide

Mesh:

Substances:

Year:  2015        PMID: 26249695      PMCID: PMC4528937          DOI: 10.1107/S2053230X15011085

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  11 in total

Review 1.  Enzymatic formation of C-terminal amides.

Authors:  R Kulathila; K A Merkler; D J Merkler
Journal:  Nat Prod Rep       Date:  1999-04       Impact factor: 13.423

2.  Melithiazol biosynthesis: further insights into myxobacterial PKS/NRPS systems and evidence for a new subclass of methyl transferases.

Authors:  Stefan Weinig; Hans-Jürgen Hecht; Taifo Mahmud; Rolf Müller
Journal:  Chem Biol       Date:  2003-10

3.  NosA catalyzing carboxyl-terminal amide formation in nosiheptide maturation via an enamine dealkylation on the serine-extended precursor peptide.

Authors:  Yi Yu; Heng Guo; Qi Zhang; Lian Duan; Ying Ding; Rijing Liao; Chun Lei; Ben Shen; Wen Liu
Journal:  J Am Chem Soc       Date:  2010-11-03       Impact factor: 15.419

4.  Expression, purification, and crystallization of the Escherichia coli selenomethionyl beta-ketoacyl-acyl carrier protein synthase III.

Authors:  S S Khandekar; A K Konstantinidis; C Silverman; C A Janson; D E McNulty; S Nwagwu; G S Van Aller; M L Doyle; J F Kane; X Qiu; J Lonsdale
Journal:  Biochem Biophys Res Commun       Date:  2000-04-02       Impact factor: 3.575

5.  Protein structure comparison by alignment of distance matrices.

Authors:  L Holm; C Sander
Journal:  J Mol Biol       Date:  1993-09-05       Impact factor: 5.469

6.  Mechanism of C-terminal amide formation by pituitary enzymes.

Authors:  A F Bradbury; M D Finnie; D G Smyth
Journal:  Nature       Date:  1982-08-12       Impact factor: 49.962

7.  Thiostrepton maturation involving a deesterification-amidation way to process the C-terminally methylated peptide backbone.

Authors:  Rijing Liao; Wen Liu
Journal:  J Am Chem Soc       Date:  2011-02-16       Impact factor: 15.419

8.  Identification in pituitary tissue of a peptide alpha-amidation activity that acts on glycine-extended peptides and requires molecular oxygen, copper, and ascorbic acid.

Authors:  B A Eipper; R E Mains; C C Glembotski
Journal:  Proc Natl Acad Sci U S A       Date:  1983-08       Impact factor: 11.205

9.  Nosiheptide biosynthesis featuring a unique indole side ring formation on the characteristic thiopeptide framework.

Authors:  Yi Yu; Lian Duan; Qi Zhang; Rijing Liao; Ying Ding; Haixue Pan; Evelyn Wendt-Pienkowski; Gongli Tang; Ben Shen; Wen Liu
Journal:  ACS Chem Biol       Date:  2009-10-16       Impact factor: 5.100

10.  Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin.

Authors:  G D Van Duyne; R F Standaert; P A Karplus; S L Schreiber; J Clardy
Journal:  J Mol Biol       Date:  1993-01-05       Impact factor: 5.469

View more
  2 in total

Review 1.  YcaO-Dependent Posttranslational Amide Activation: Biosynthesis, Structure, and Function.

Authors:  Brandon J Burkhart; Christopher J Schwalen; Greg Mann; James H Naismith; Douglas A Mitchell
Journal:  Chem Rev       Date:  2017-03-03       Impact factor: 60.622

Review 2.  New developments in RiPP discovery, enzymology and engineering.

Authors:  Manuel Montalbán-López; Thomas A Scott; Sangeetha Ramesh; Imran R Rahman; Auke J van Heel; Jakob H Viel; Vahe Bandarian; Elke Dittmann; Olga Genilloud; Yuki Goto; María José Grande Burgos; Colin Hill; Seokhee Kim; Jesko Koehnke; John A Latham; A James Link; Beatriz Martínez; Satish K Nair; Yvain Nicolet; Sylvie Rebuffat; Hans-Georg Sahl; Dipti Sareen; Eric W Schmidt; Lutz Schmitt; Konstantin Severinov; Roderich D Süssmuth; Andrew W Truman; Huan Wang; Jing-Ke Weng; Gilles P van Wezel; Qi Zhang; Jin Zhong; Jörn Piel; Douglas A Mitchell; Oscar P Kuipers; Wilfred A van der Donk
Journal:  Nat Prod Rep       Date:  2020-09-16       Impact factor: 15.111

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.