Literature DB >> 26249680

Structure of recombinant prolidase from Thermococcus sibiricus in space group P21221.

Vladimir Timofeev1, Elvira Slutskaya2, Marina Gorbacheva1, Konstantin Boyko1, Tatiana Rakitina1, Dmitry Korzhenevskiy1, Alexey Lipkin1, Vladimir Popov1.   

Abstract

The crystal structure of recombinant prolidase from Thermococcus sibiricus was determined by X-ray diffraction at a resolution of 2.6 Å and was found to contain a tetramer in the asymmetric unit. A protein crystal grown in microgravity using the counter-diffusion method was used for X-ray studies. The crystal belonged to space group P21221, with unit-cell parameters a = 97.60, b = 123.72, c = 136.52 Å, α = β = γ = 90°. The structure was refined to an Rcryst of 22.1% and an Rfree of 29.6%. The structure revealed flexible folding of the N-terminal domain of the protein as well as high variability in the positions of the bound metal ions. The coordinates of the resulting model were deposited in the Protein Data Bank as entry 4rgz.

Entities:  

Keywords:  Thermococcus sibiricus; archaeal proteins; crystallization; crystallography; prolidase

Mesh:

Substances:

Year:  2015        PMID: 26249680      PMCID: PMC4528922          DOI: 10.1107/S2053230X15009498

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  23 in total

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Authors:  A A Trofimov; E A Slutskaya; K M Polyakov; P V Dorovatovskii; V M Gumerov; V O Popov
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-10-26

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9.  Structure of the prolidase from Pyrococcus furiosus.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
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