Literature DB >> 26249322

Identification of aqueous pollen extracts using surface enhanced Raman scattering (SERS) and pattern recognition methods.

Stephan Seifert1,2, Virginia Merk1, Janina Kneipp3,4.   

Abstract

Aqueous pollen extracts of varying taxonomic relations were analyzed with surface enhanced Raman scattering (SERS) by using gold nanoparticles in aqueous suspensions as SERS substrate. This enables a selective vibrational characterization of the pollen water soluble fraction (mostly cellular components) devoid of the spectral contributions from the insoluble sporopollenin outer layer. The spectra of the pollen extracts are species-specific, and the chemical fingerprints can be exploited to achieve a classification that can distinguish between different species of the same genus. In the simple experimental procedure, several thousands of spectra per species are generated. Using an artificial neural network (ANN), it is demonstrated that analysis of the intrinsic biochemical information of the pollen cells in the SERS data enables the identification of pollen from different plant species at high accuracy. The ANN extracts the taxonomically-relevant information from the data in spite of high intra-species spectral variation caused by signal fluctuations and preparation specifics. The results show that SERS can be used for the reliable characterization and identification of pollen samples. They have implications for improved investigation of pollen physiology and for allergy warning.
© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Surface enhanced Raman scattering (SERS); artificial neural networks (ANN); multivariate statistics; pattern recognition; pollen

Mesh:

Substances:

Year:  2015        PMID: 26249322     DOI: 10.1002/jbio.201500176

Source DB:  PubMed          Journal:  J Biophotonics        ISSN: 1864-063X            Impact factor:   3.207


  16 in total

1.  Multivariate Analysis of MALDI Imaging Mass Spectrometry Data of Mixtures of Single Pollen Grains.

Authors:  Franziska Lauer; Sabrina Diehn; Stephan Seifert; Janina Kneipp; Volker Sauerland; Cesar Barahona; Steffen Weidner
Journal:  J Am Soc Mass Spectrom       Date:  2018-07-24       Impact factor: 3.109

2.  Mixture Analyses of Air-sampled Pollen Extracts Can Accurately Differentiate Pollen Taxa.

Authors:  Leszek J Klimczak; Cordula Ebner von Eschenbach; Peter M Thompson; Jeroen T M Buters; Geoffrey A Mueller
Journal:  Atmos Environ (1994)       Date:  2020-07-06       Impact factor: 4.798

3.  New methodology to process shifted excitation Raman difference spectroscopy data: a case study of pollen classification.

Authors:  F Korinth; A S Mondol; C Stiebing; I W Schie; C Krafft; J Popp
Journal:  Sci Rep       Date:  2020-07-08       Impact factor: 4.379

4.  Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) shows adaptation of grass pollen composition.

Authors:  Sabrina Diehn; Boris Zimmermann; Murat Bağcıoğlu; Stephan Seifert; Achim Kohler; Mikael Ohlson; Siri Fjellheim; Steffen Weidner; Janina Kneipp
Journal:  Sci Rep       Date:  2018-11-08       Impact factor: 4.379

5.  Quantitative Determination of Chlormequat Chloride Residue in Wheat Using Surface-Enhanced Raman Spectroscopy.

Authors:  Shizhuang Weng; Mengqing Qiu; Ronglu Dong; Fang Wang; Jinling Zhao; Linsheng Huang; Dongyan Zhang
Journal:  Int J Anal Chem       Date:  2018-07-10       Impact factor: 1.885

6.  Chemical characterization and identification of Pinaceae pollen by infrared microspectroscopy.

Authors:  Boris Zimmermann
Journal:  Planta       Date:  2017-09-14       Impact factor: 4.116

7.  Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus.

Authors:  Ingrid Zeise; Zsuzsanna Heiner; Sabine Holz; Maike Joester; Carmen Büttner; Janina Kneipp
Journal:  Plants (Basel)       Date:  2018-01-25

Review 8.  Analysis of Biomolecules Based on the Surface Enhanced Raman Spectroscopy.

Authors:  Min Jia; Shenmiao Li; Liguo Zang; Xiaonan Lu; Hongyan Zhang
Journal:  Nanomaterials (Basel)       Date:  2018-09-15       Impact factor: 5.076

9.  Detection of Pirimiphos-Methyl in Wheat Using Surface-Enhanced Raman Spectroscopy and Chemometric Methods.

Authors:  Shizhuang Weng; Shuan Yu; Ronglu Dong; Jinling Zhao; Dong Liang
Journal:  Molecules       Date:  2019-04-30       Impact factor: 4.411

10.  Application of random forest based approaches to surface-enhanced Raman scattering data.

Authors:  Stephan Seifert
Journal:  Sci Rep       Date:  2020-03-25       Impact factor: 4.379

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