Literature DB >> 262445

Displacements of backbone vibrational modes of A-DNA and B-DNA.

K C Lu, L L Van Zandt, E W Prohofsky.   

Abstract

We display the displacement vectors or eigenvectors of calculations of the A- and B-DNA backbones. These calculations are based on a refinement scheme that simultaneously fit several backbone modes of A-DNA, B-DNA, and A-RNA. We discuss the role of symmetry operations in mode calculations and the relevance of these displacement vectors to the interpretation of linear dichroism measurements performed on the A- and B-DNA helix.

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Year:  1979        PMID: 262445      PMCID: PMC1328607          DOI: 10.1016/S0006-3495(79)85156-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  5 in total

1.  Backbone conformational change in the A to B Transition of deoxyribonucleic acid.

Authors:  T Kursar; G Holzwarth
Journal:  Biochemistry       Date:  1976-07-27       Impact factor: 3.162

2.  A reinterpretation of the infrared linear dichroism of oriented nucleic acid films and a calculation of some effective partial changes on the ribose phosphate backbone.

Authors:  C P Beetz; G Ascarelli; S Arnott
Journal:  Biophys J       Date:  1979-10       Impact factor: 4.033

3.  Vibrational modes of A-DNA, B-DNA, and A-RNA backbones: an application of a green-function refinement procedure.

Authors:  K C Lu; E W Prohofsky; L L Van Zandt
Journal:  Biopolymers       Date:  1977-11       Impact factor: 2.505

4.  Lattice vibrational modes of poly(rU) and poly(rA).

Authors:  J M Eyster; E W Prohofsky
Journal:  Biopolymers       Date:  1974-12       Impact factor: 2.505

5.  Optimised parameters for A-DNA and B-DNA.

Authors:  S Arnott; D W Hukins
Journal:  Biochem Biophys Res Commun       Date:  1972-06-28       Impact factor: 3.575

  5 in total
  5 in total

1.  A reinterpretation of the infrared linear dichroism of oriented nucleic acid films and a calculation of some effective partial changes on the ribose phosphate backbone.

Authors:  C P Beetz; G Ascarelli; S Arnott
Journal:  Biophys J       Date:  1979-10       Impact factor: 4.033

2.  Microwave-field-driven acoustic modes in DNA.

Authors:  G S Edwards; C C Davis; J D Saffer; M L Swicord
Journal:  Biophys J       Date:  1985-06       Impact factor: 4.033

3.  The B reversible Z transition of poly(dI-br5dC).poly(dI-br5dC). A quantitative description of the Z form dynamic structure.

Authors:  B Hartmann; J Pilet; M Ptak; J Ramstein; B Malfoy; M Leng
Journal:  Nucleic Acids Res       Date:  1982-05-25       Impact factor: 16.971

4.  Comparison of poly(dG-dC).poly(dG-dC) conformations in oriented films and in solution.

Authors:  J Pilet; M Leng
Journal:  Proc Natl Acad Sci U S A       Date:  1982-01       Impact factor: 11.205

5.  Hydrogen bonding in DNA base complexes.

Authors:  B M Powell; P Martel
Journal:  Biophys J       Date:  1981-05       Impact factor: 4.033

  5 in total

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