Literature DB >> 26242376

Identification and genomic analysis of a novel member of Microviridae, IME-16, through high-throughput sequencing.

Peng Shu1, Azeem Mehmood Butt, Zhiqiang Mi, Wei Wang, Xiaoping An, Guangqian Pei, Zhiyi Zhang, Yong Huang, Xianglilan Zhang, Taoxing Shi, Yigang Tong.   

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Year:  2015        PMID： 26242376      PMCID： PMC8200858          DOI： 10.1007/s12250-015-3596-1

Source DB:  PubMed          Journal:  Virol Sin        ISSN： 1995-820X            Impact factor:   4.327


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  15 in total

1.  Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes and archaebacteria.

Authors:  T V Ilyina; E V Koonin
Journal:  Nucleic Acids Res       Date:  1992-07-11       Impact factor: 16.971

2.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

3.  NGS QC Toolkit: a toolkit for quality control of next generation sequencing data.

Authors:  Ravi K Patel; Mukesh Jain
Journal:  PLoS One       Date:  2012-02-01       Impact factor: 3.240

4.  Biodiversity and biogeography of phages in modern stromatolites and thrombolites.

Authors:  Christelle Desnues; Beltran Rodriguez-Brito; Steve Rayhawk; Scott Kelley; Tuong Tran; Matthew Haynes; Hong Liu; Mike Furlan; Linda Wegley; Betty Chau; Yijun Ruan; Dana Hall; Florent E Angly; Robert A Edwards; Linlin Li; Rebecca Vega Thurber; R Pamela Reid; Janet Siefert; Valeria Souza; David L Valentine; Brandon K Swan; Mya Breitbart; Forest Rohwer
Journal:  Nature       Date:  2008-03-02       Impact factor: 49.962

Review 5.  Bacteriophage therapy: exploiting smaller fleas.

Authors:  Stan Deresinski
Journal:  Clin Infect Dis       Date:  2009-04-15       Impact factor: 9.079

Review 6.  Genomics of bacterial and archaeal viruses: dynamics within the prokaryotic virosphere.

Authors:  Mart Krupovic; David Prangishvili; Roger W Hendrix; Dennis H Bamford
Journal:  Microbiol Mol Biol Rev       Date:  2011-12       Impact factor: 11.056

7.  MatGAT: an application that generates similarity/identity matrices using protein or DNA sequences.

Authors:  James J Campanella; Ledion Bitincka; John Smalley
Journal:  BMC Bioinformatics       Date:  2003-07-10       Impact factor: 3.169

8.  Metagenomic analysis of respiratory tract DNA viral communities in cystic fibrosis and non-cystic fibrosis individuals.

Authors:  Dana Willner; Mike Furlan; Matthew Haynes; Robert Schmieder; Florent E Angly; Joas Silva; Sassan Tammadoni; Bahador Nosrat; Douglas Conrad; Forest Rohwer
Journal:  PLoS One       Date:  2009-10-09       Impact factor: 3.240

9.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969

10.  Diversity of environmental single-stranded DNA phages revealed by PCR amplification of the partial major capsid protein.

Authors:  Max Hopkins; Shweta Kailasan; Allison Cohen; Simon Roux; Kimberly Pause Tucker; Amelia Shevenell; Mavis Agbandje-McKenna; Mya Breitbart
Journal:  ISME J       Date:  2014-04-03       Impact factor: 10.302
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  1 in total

1.  Unprecedented Diversity of ssDNA Phages from the Family Microviridae Detected within the Gut of a Protochordate Model Organism (Ciona robusta).

Authors:  Alexandria Creasy; Karyna Rosario; Brittany A Leigh; Larry J Dishaw; Mya Breitbart
Journal:  Viruses       Date:  2018-07-31       Impact factor: 5.048
  1 in total

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