Literature DB >> 26240502

An Appropriate Lower Respiratory Tract Specimen Is Essential for Diagnosis of Middle East Respiratory Syndrome (MERS).

Jae Hoon Lee1, Chang-Seop Lee2, Heung-Bum Lee2.   

Abstract

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Year:  2015        PMID: 26240502      PMCID: PMC4520955          DOI: 10.3346/jkms.2015.30.8.1207

Source DB:  PubMed          Journal:  J Korean Med Sci        ISSN: 1011-8934            Impact factor:   2.153


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The editorial, "Better understanding on MERS Coronavirus (MERS-CoV) outbreak in Korea," was previously published by Lee (1). He briefly summarized the ongoing status of the Middle East Respiratory Syndrome (MERS) outbreak and emphasized close monitoring of medical staffs, patients, and visitors, and timely well-designed briefings to mass media. He pointed out critical aspects to control the MERS-CoV outbreak in Korea. The present opinion proposes a topic on MERS by focusing on early diagnosis of patients via appropriate specimen collection. As on July 2, 2015, there have been 183 confirmed cases of MERS and 33 fatalities reported in the Republic of Korea (2). This national outbreak of MERS has not been controlled yet but there is a rapid decrease in the number of current infections and fatalities. All patients in Korea acquired their disease in hospital settings where they came in direct or indirect contact with MERS patients. The Ministry of Health and Welfare and the Korea Centers for Disease Control and Prevention have carried out strong enforcement measures including quarantine care for up to 14 days (the maximum incubation period of the disease) in cases of symptomatic travelers from the Arabian Peninsula who arrived in Korea within the past 2 weeks and individuals who came in close contact with confirmed cases of MERS (2). Suspicious cases are transferred to an assigned hospital if symptoms occur during the observation period. Real-time reverse-transcription polymerase chain reaction (RT-PCR) assay conducted in 48-hour-intervals using respiratory samples is the standard diagnostic tool for MERS. A 63-year-old man developed fever, chills, and myalgia on June 10, 2015. On May 27, he visited the emergency department of a hospital that had previously reported several cases of MERS. During this time, he stayed in close contact with a laboratory-confirmed MERS patient. He was quarantined on May 27, 2015 at his home and he developed fever and chills, nausea, anorexia, and myalgia after the quarantine isolation. He was then moved to an institutional isolation care unit where real-time RT-PCR was conducted twice on sputum samples in 48-hour-intervals and resulted in negative findings. He was afebrile but his gastrointestinal discomfort and myalgia continued, and the isolation location was changed to his home on June 2, 2015 because he was improving. On June 8, he became febrile with symptoms of cough, dyspnea, and myalgia, which gradually deteriorated. He was tested again and the results returned positive for MERS-CoV on June 10. Radiographic findings revealed far-progressed bilateral peripheral radio-opacities. Some reasons that could be considered for the delayed diagnosis of MERS include: 1) low initial viral load and shedding, and 2) poor sample collection in patients with "no cough" or dry cough. Rapid and correct diagnosis of infection and control measures are critical in preventing the possible spread of MERS-CoV. However, the early symptoms of MERS are non-specific and are the same as those of common pneumonia. In this context, it is very important to conduct thorough and careful patient interviews with a high interest of MERS in mind and to obtain optimal samples for diagnosis. In the clinical findings of patients infected with MERS-CoV, patients with dry cough are more common than patients with productive sputum (34). Therefore, optimal sample collection is frequently limited, particularly in patients with no cough or dry cough. Dipeptidyl peptidase 4 (DPP4) has been identified as the receptor for MERS-CoV (5). DPP4 is expressed in type I and II alveolar cells, ciliated or non-ciliated bronchial epithelium, and bronchial submucosal glands (56). This corresponds with viral tropism in ex vivo human lung cultures (567). In studies with rhesus macaques, intra-tracheally inoculated virus was present in the lungs but neither in the upper respiratory tracts, trachea, nor other organs (89). All of marmosets infected with a high dose of MERS-CoV via various routes showed multifocal to coalescing, moderate to marked acute broncho-interstitial pneumonia centered on small calibre and terminal bronchioles which further extended into the adjacent pulmonary parenchyma. In summary, in vitro and in vivo studies concluded that MERS-CoV had adherence to the lower respiratory tract and high viral loads were mainly detected in distal respiratory tissues. Therefore, lower respiratory tract specimens such as bronchoalveolar lavage fluid, deep tracheal aspirates, and induced sputum contain the highest viral loads which are optimal for increasing diagnostic accuracy (10111213). In re-evaluating the patient's diagnostic history, his viral load could have been low due to the early phase of disease and/or could have been falsely negative due to inadequate dry cough-linked respiratory samples. In any occasion, his diagnosis was quite delayed. Delayed diagnosis of patients is inevitably linked to delayed quarantine care of persons with contact history. To obtain an accurate diagnosis, the circumstances in the early phase of MERS-CoV infection should be considered and at least two repeated diagnostic tests during the late incubation period should be considered for patients with less severity but persistent symptoms. The nationwide pneumonia census has been conducted to identify hidden MERS-CoV infections. However, inadequate sputum specimens must have resulted in false negatives. For accurate surveying, appropriate specimens should have been obtained by collecting sputum from the lungs or bronchi and not saliva. In suspicious patients who are unable to produce sputum for examination, aerosol administration of a hypertonic saline solution may be used to increase the flow of secretions and stimulate coughing. However, during the procedure of induced specimen collection, clinicians must consider the high risk of contamination of the surroundings because the procedure would create a large amount of aerosols and increase the risk of transmitting the virus to other individuals. The optimum time for collection of a sputum specimen is in the early morning before eating or drinking. At this time secretions accumulated in the bronchi through the night are more readily available. In conclusion, to control the MERS-CoV infection completely, delicate history taking related with MERS is very important, and appropriate specimen collection is essential as well. Moreover, even two real-time RT-PCR tests in negative results during the early stage of the disease process cannot rule out silent MERS-CoV infections. Clinicians should consider the possibility of false negative real-time RT-PCR findings resulting from inappropriate sample collection. Finally, a sufficient period and strict quarantine of suspected cases are critical for control of the MERS outbreak in Korea.
  11 in total

1.  Emerging human middle East respiratory syndrome coronavirus causes widespread infection and alveolar damage in human lungs.

Authors:  Andreas C Hocke; Anne Becher; Jessica Knepper; Andrea Peter; Gudrun Holland; Mario Tönnies; Torsten T Bauer; Paul Schneider; Jens Neudecker; Doreen Muth; Clemens M Wendtner; Jens C Rückert; Christian Drosten; Achim D Gruber; Michael Laue; Norbert Suttorp; Stefan Hippenstiel; Thorsten Wolff
Journal:  Am J Respir Crit Care Med       Date:  2013-10-01       Impact factor: 21.405

2.  Middle East respiratory syndrome coronavirus (MERS-CoV) causes transient lower respiratory tract infection in rhesus macaques.

Authors:  Emmie de Wit; Angela L Rasmussen; Darryl Falzarano; Trenton Bushmaker; Friederike Feldmann; Douglas L Brining; Elizabeth R Fischer; Cynthia Martellaro; Atsushi Okumura; Jean Chang; Dana Scott; Arndt G Benecke; Michael G Katze; Heinz Feldmann; Vincent J Munster
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-23       Impact factor: 11.205

3.  Better Understanding on MERS Corona Virus Outbreak in Korea.

Authors:  Jacob Lee
Journal:  J Korean Med Sci       Date:  2015-07       Impact factor: 2.153

Review 4.  Pathogenesis of Middle East respiratory syndrome coronavirus.

Authors:  Judith M A van den Brand; Saskia L Smits; Bart L Haagmans
Journal:  J Pathol       Date:  2015-01       Impact factor: 7.996

5.  First confirmed cases of Middle East respiratory syndrome coronavirus (MERS-CoV) infection in the United States, updated information on the epidemiology of MERS-CoV infection, and guidance for the public, clinicians, and public health authorities - May 2014.

Authors:  Stephanie R Bialek; Donna Allen; Francisco Alvarado-Ramy; Ray Arthur; Arunmozhi Balajee; David Bell; Susan Best; Carina Blackmore; Lucy Breakwell; Andrew Cannons; Clive Brown; Martin Cetron; Nora Chea; Christina Chommanard; Nicole Cohen; Craig Conover; Antonio Crespo; Jeanean Creviston; Aaron T Curns; Rebecca Dahl; Stephanie Dearth; Alfred DeMaria; Fred Echols; Dean D Erdman; Daniel Feikin; Mabel Frias; Susan I Gerber; Reena Gulati; Christa Hale; Lia M Haynes; Lea Heberlein-Larson; Kelly Holton; Kashef Ijaz; Minal Kapoor; Katrin Kohl; David T Kuhar; Alan M Kumar; Marianne Kundich; Susan Lippold; Lixia Liu; Judith C Lovchik; Larry Madoff; Sandra Martell; Sarah Matthews; Jessica Moore; Linda R Murray; Shauna Onofrey; Mark A Pallansch; Nicki Pesik; Huong Pham; Satish Pillai; Pam Pontones; Kimberly Pringle; Scott Pritchard; Sonja Rasmussen; Shawn Richards; Michelle Sandoval; Eileen Schneider; Anne Schuchat; Kristine Sheedy; Kevin Sherin; David L Swerdlow; Jordan W Tappero; Michael O Vernon; Sharon Watkins; John Watson
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2014-05-16       Impact factor: 17.586

6.  Clinical features and viral diagnosis of two cases of infection with Middle East Respiratory Syndrome coronavirus: a report of nosocomial transmission.

Authors:  Benoit Guery; Julien Poissy; Loubna el Mansouf; Caroline Séjourné; Nicolas Ettahar; Xavier Lemaire; Fanny Vuotto; Anne Goffard; Sylvie Behillil; Vincent Enouf; Valérie Caro; Alexandra Mailles; Didier Che; Jean-Claude Manuguerra; Daniel Mathieu; Arnaud Fontanet; Sylvie van der Werf
Journal:  Lancet       Date:  2013-05-30       Impact factor: 79.321

7.  Respiratory tract samples, viral load, and genome fraction yield in patients with Middle East respiratory syndrome.

Authors:  Ziad A Memish; Jaffar A Al-Tawfiq; Hatem Q Makhdoom; Abdullah Assiri; Raafat F Alhakeem; Ali Albarrak; Sarah Alsubaie; Abdullah A Al-Rabeeah; Waleed H Hajomar; Raheela Hussain; Ali M Kheyami; Abdullah Almutairi; Esam I Azhar; Christian Drosten; Simon J Watson; Paul Kellam; Matthew Cotten; Alimuddin Zumla
Journal:  J Infect Dis       Date:  2014-05-15       Impact factor: 5.226

8.  Dipeptidyl peptidase 4 is a functional receptor for the emerging human coronavirus-EMC.

Authors:  V Stalin Raj; Huihui Mou; Saskia L Smits; Dick H W Dekkers; Marcel A Müller; Ronald Dijkman; Doreen Muth; Jeroen A A Demmers; Ali Zaki; Ron A M Fouchier; Volker Thiel; Christian Drosten; Peter J M Rottier; Albert D M E Osterhaus; Berend Jan Bosch; Bart L Haagmans
Journal:  Nature       Date:  2013-03-14       Impact factor: 49.962

9.  Epidemiological, demographic, and clinical characteristics of 47 cases of Middle East respiratory syndrome coronavirus disease from Saudi Arabia: a descriptive study.

Authors:  Abdullah Assiri; Jaffar A Al-Tawfiq; Abdullah A Al-Rabeeah; Fahad A Al-Rabiah; Sami Al-Hajjar; Ali Al-Barrak; Hesham Flemban; Wafa N Al-Nassir; Hanan H Balkhy; Rafat F Al-Hakeem; Hatem Q Makhdoom; Alimuddin I Zumla; Ziad A Memish
Journal:  Lancet Infect Dis       Date:  2013-07-26       Impact factor: 25.071

10.  Kinetics and pattern of viral excretion in biological specimens of two MERS-CoV cases.

Authors:  J Poissy; A Goffard; E Parmentier-Decrucq; R Favory; M Kauv; E Kipnis; D Mathieu; S van der Werf; B Guery
Journal:  J Clin Virol       Date:  2014-07-12       Impact factor: 3.168

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Review 1.  MERS coronavirus: diagnostics, epidemiology and transmission.

Authors:  Ian M Mackay; Katherine E Arden
Journal:  Virol J       Date:  2015-12-22       Impact factor: 4.099

Review 2.  Critically ill patients with Middle East respiratory syndrome coronavirus infection.

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Journal:  Crit Care       Date:  2016-03-16       Impact factor: 9.097

3.  The critical care response to a hospital outbreak of Middle East respiratory syndrome coronavirus (MERS-CoV) infection: an observational study.

Authors:  Hasan M Al-Dorzi; Abdulaziz S Aldawood; Raymond Khan; Salim Baharoon; John D Alchin; Amal A Matroud; Sameera M Al Johany; Hanan H Balkhy; Yaseen M Arabi
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Review 4.  Middle East respiratory syndrome: what we learned from the 2015 outbreak in the Republic of Korea.

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Journal:  Korean J Intern Med       Date:  2018-02-27       Impact factor: 2.884

Review 5.  Viral Pneumonia and Acute Respiratory Distress Syndrome.

Authors:  Raj D Shah; Richard G Wunderink
Journal:  Clin Chest Med       Date:  2016-12-13       Impact factor: 2.878

6.  Sputum Processing Method for Lateral Flow Immunochromatographic Assays to Detect Coronaviruses.

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7.  Infection with Middle East respiratory syndrome coronavirus.

Authors:  Sami Alsolamy; Yaseen M Arabi
Journal:  Can J Respir Ther       Date:  2015

8.  Comparative Evaluation of Three Homogenization Methods for Isolating Middle East Respiratory Syndrome Coronavirus Nucleic Acids From Sputum Samples for Real-Time Reverse Transcription PCR.

Authors:  Heungsup Sung; Dongeun Yong; Chang Seok Ki; Jae Seok Kim; Moon Woo Seong; Hyukmin Lee; Mi Na Kim
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9.  A study of the probable transmission routes of MERS-CoV during the first hospital outbreak in the Republic of Korea.

Authors:  S Xiao; Y Li; M Sung; J Wei; Z Yang
Journal:  Indoor Air       Date:  2017-10-23       Impact factor: 5.770

10.  Clinical implication of radiographic scores in acute Middle East respiratory syndrome coronavirus pneumonia: Report from a single tertiary-referral center of South Korea.

Authors:  Min Jae Cha; Myung Jin Chung; Kyunga Kim; Kyung Soo Lee; Tae Jung Kim; Tae Sung Kim
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