Literature DB >> 26238459

DNA barcode and evolutionary relationship within Laemolyta Cope 1872 (Characiformes: Anostomidae) through molecular analyses.

Jorge L Ramirez1, Pedro M Galetti2.   

Abstract

The Laemolyta genus is a monophyletic group with five valid species. Phylogenetic relationships among the species of this genus are unknown. We analyzed four nominal Laemolyta species. The COI gene for all individuals was amplified and the genetic distances were estimated. We performed genetic distance analyses to determine the different MOTUs. Two mitochondrial (COI and CytB) and three nuclear (Myh6, RAG1 and RAG2) markers were amplified for one individual of each identified MOTU. Maximum Parsimony and Maximum Likelihood were conducted using concatenate alignment. In addition, multilocus Bayesian species tree was carried out. By using DNA barcode, we identified six different MOTUs. The COI inter-MOTU distances ranged from 0.92% to 5.76%. The normalized mean intra-MOTU distance was 0.13%. The DNA barcode was useful to diagnose all species. Two clades showing distinct color patterns were recovered in all molecular phylogenetic trees. Clade A joined fishes with no vertical bars (L. garmani, L. taeniata 1 and L. taeniata 2) and clade B, fishes with vertical dark bars (L. fernandezi Araguaia, L. fernandezi Xingu, and L. proxima). The results were able to identify the cryptic biodiversity within the group and obtained the most complete Laemolyta phylogeny.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Anostomids; Cryptic species; Molecular phylogeny; Neotropical fishes

Mesh:

Substances:

Year:  2015        PMID: 26238459     DOI: 10.1016/j.ympev.2015.07.021

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  4 in total

1.  Molecular analysis reveals hidden diversity in Zungaro (Siluriformes: Pimelodidade): a genus of giant South American catfish.

Authors:  Antonio A Pires; Jorge L Ramirez; Pedro M Galetti; Waldo P Troy; Patricia D Freitas
Journal:  Genetica       Date:  2017-05-13       Impact factor: 1.082

2.  Molecular Evidences of a Hidden Complex Scenario in Leporinus cf. friderici.

Authors:  Rosane Silva-Santos; Jorge L Ramirez; Pedro M Galetti; Patrícia D Freitas
Journal:  Front Genet       Date:  2018-02-15       Impact factor: 4.599

3.  DNA barcoding reveals cryptic diversity in the underestimated genus Triplophysa (Cypriniformes: Cobitidae, Nemacheilinae) from the northeastern Qinghai-Tibet Plateau.

Authors:  Tai Wang; Yan-Ping Zhang; Zhuo-Yu Yang; Zhe Liu; Yan-Yan Du
Journal:  BMC Evol Biol       Date:  2020-11-12       Impact factor: 3.260

4.  Revealing Hidden Diversity of the Underestimated Neotropical Ichthyofauna: DNA Barcoding in the Recently Described Genus Megaleporinus (Characiformes: Anostomidae).

Authors:  Jorge L Ramirez; Jose L Birindelli; Daniel C Carvalho; Paulo R A M Affonso; Paulo C Venere; Hernán Ortega; Mauricio Carrillo-Avila; José A Rodríguez-Pulido; Pedro M Galetti
Journal:  Front Genet       Date:  2017-10-12       Impact factor: 4.599

  4 in total

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