| Literature DB >> 26236390 |
B Rodriguez-Vila1, J Tarjuelo-Gutierrez2, P Sánchez-González2, P Verbrugghe3, I Fourneau3, G Maleux3, P Herijgers3, E J Gomez1.
Abstract
A correct patient-specific identification of the abdominal aortic aneurysm is useful for both diagnosis and treatment stages, as it locates the disease and represents its geometry. The actual thickness and shape of the arterial wall and the intraluminal thrombus are of great importance when predicting the rupture of the abdominal aortic aneurysms. The authors describe a novel method for delineating both the internal and external contours of the aortic wall, which allows distinguishing between vessel wall and intraluminal thrombus. The method is based on active shape model and texture statistical information. The method was validated with eight MR patient studies. There was high correspondence between automatic and manual measurements for the vessel wall area. Resulting segmented images presented a mean Dice coefficient with respect to manual segmentations of 0.88 and a mean modified Hausdorff distance of 1.14 mm for the internal face and 0.86 and 1.33 mm for the external face of the arterial wall. Preliminary results of the segmentation show high correspondence between automatic and manual measurements for the vessel wall and thrombus areas. However, since the dataset is small the conclusions cannot be generalized.Entities:
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Year: 2015 PMID: 26236390 PMCID: PMC4509500 DOI: 10.1155/2015/202539
Source DB: PubMed Journal: Comput Math Methods Med ISSN: 1748-670X Impact factor: 2.238
Figure 1(a) MR transversal bSSFP for thrombus and outer wall segmentation; (b) MR coronal FLASH for lumen segmentation; (c) CTA image for shape modelling.
Figure 2Diagram of the proposed segmentation algorithm. The initial training stage guides the segmentation process from the inner structures (lumen), through the thrombus, to the outer wall boundary.
Figure 3Example of the texture characterization. For every landmark on the manual delineation, a 11 × 3 mm region perpendicular to the contour and centred in the landmark is defined. The pixels of the region are labelled as “interior” or “exterior” depending on their relative position with the landmark location.
Figure 4Significant variation modes of the transversal sections of the aorta, showing a variation of the average shape of .
Dice coefficient (%) between the manual and the automatic segmentations of the thrombus boundary of the 8 patient datasets for the different combination of texture statistics.
| DC (%) | P1 | P2 | P3 | P4 | P5 | P6 | P7 | P8 | Mean |
|---|---|---|---|---|---|---|---|---|---|
| Δ | 89.7 | 81.5 | 91.0 | 89.8 | 86.2 | 82.0 | 88.5 | 88.8 | 87.2 |
| Δ | 90.6 | 82.0 | 91.1 | 89.4 | 87.4 | 82.2 | 88.8 | 89.2 | 87.6 |
| Δ | 90.3 | 82.3 | 91.3 | 89.3 | 86.2 | 82.0 | 88.2 | 89.2 | 87.3 |
| Δ | 89.6 | 81.6 | 90.7 | 89.3 | 86.2 | 81.2 | 87.9 | 88.6 | 86.9 |
| Δ | 89.8 | 81.4 | 90.8 | 89.2 | 86.1 | 81.3 | 88.0 | 88.7 | 86.9 |
| Δ | 89.5 | 81.1 | 90.5 | 88.9 | 85.9 | 81.3 | 87.8 | 88.5 | 86.7 |
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Figure 5Thrombus boundary for different patients and slices: ((a)–(c)) wrong texture-based proposals; ((d)–(f)) shape-driven corrections.
Figure 6Outer wall boundary for different patients and slices: ((a)–(c)) wrong texture-based proposals; ((d)–(f)) shape-driven corrections.
Dice coefficient (DC) and modified Hausdorff distance (MHD), between the automatic delineations and the manual delineations performed by an expert, for the eight cases of the dataset and the two structures of interest.
| P1 | P2 | P3 | P4 | P5 | P6 | P7 | P8 | Av. | St. dev. | |
|---|---|---|---|---|---|---|---|---|---|---|
| Thrombus boundary | ||||||||||
| DC | 0.91 | 0.82 | 0.91 | 0.90 | 0.88 | 0.83 | 0.89 | 0.90 | 0.88 | 0.03 |
| MHD (mm) | 0.88 | 1.91 | 0.76 | 1.24 | 0.94 | 1.29 | 1.28 | 0.86 | 1.14 | 0.37 |
| Outer wall boundary | ||||||||||
| DC | 0.89 | 0.81 | 0.90 | 0.89 | 0.87 | 0.83 | 0.86 | 0.87 | 0.86 | 0.03 |
| MHD (mm) | 0.90 | 2.28 | 0.79 | 1.33 | 0.77 | 2.35 | 1.37 | 0.92 | 1.31 | 0.62 |
Figure 7Patient 2 (top). Patient 6 (bottom). 3D reconstruction of aortic wall and ILT (left). MR slice with the manual (straight line) and automatic (dotted line) delineations (right).