Literature DB >> 26231488

Assessment of DNA Integrity, Applications for Cancer Research.

Eleonora Zonta1, Philippe Nizard1, Valérie Taly2.   

Abstract

Many methods have been developed for DNA integrity assessment including electrophoresis-based procedures, quantitative PCR, and, more recently, microfluidics-based procedures. DNA integrity evaluation can be employed for characterizing biological samples quality before extensive genomic analysis and also finds applications in reproductive medicine, prenatal diagnostics, or cancer research. In this chapter, we will focus on the assessment of DNA integrity in cancer research. In particular, we will present the application of the determination of DNA integrity for tracking of circulating tumor DNA. Finally, we will conclude by illustrating the potential innovative application of DNA integrity as a biomarker in clinical research, especially for prognostic purposes, patient follow-up, or early diagnosis.
© 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  ALU elements; Cancer biomarker; Cell-free circulating DNA; Circulating tumor DNA; DNA integrity index; DNA quality; DNA size profiling; dPCR; qPCR

Mesh:

Substances:

Year:  2015        PMID: 26231488     DOI: 10.1016/bs.acc.2015.03.002

Source DB:  PubMed          Journal:  Adv Clin Chem        ISSN: 0065-2423            Impact factor:   5.394


  13 in total

1.  Counteracting Environmental Chemicals with Coenzyme Q10: An Educational Primer for Use with "Antioxidant CoQ10 Restores Fertility by Rescuing Bisphenol A-Induced Oxidative DNA Damage in the Caenorhabditis elegans Germline".

Authors:  Beatrix R Bradford; Nicole E Briand; Nina Fassnacht; Esabelle D Gervasio; Aidan M Nowakowski; Theresa C FitzGibbon; Stephanie Maurina; Alexis V Benjamin; MaryEllen Kelly; Paula M Checchi
Journal:  Genetics       Date:  2020-12       Impact factor: 4.562

Review 2.  Liquid Biopsy and its Potential for Management of Hepatocellular Carcinoma.

Authors:  Jian Zhou; Ao Huang; Xin-Rong Yang
Journal:  J Gastrointest Cancer       Date:  2016-06

3.  Cell-Free DNA Integrity Analysis in Urine Samples.

Authors:  Valentina Casadio; Samanta Salvi; Filippo Martignano; Roberta Gunelli; Sara Ravaioli; Daniele Calistri
Journal:  J Vis Exp       Date:  2017-01-05       Impact factor: 1.355

Review 4.  The Utility of Repetitive Cell-Free DNA in Cancer Liquid Biopsies.

Authors:  Ugur Gezer; Abel J Bronkhorst; Stefan Holdenrieder
Journal:  Diagnostics (Basel)       Date:  2022-06-01

5.  Association between clinical characteristics and the diagnostic accuracy of circulating single-molecule amplification and resequencing technology on detection epidermal growth factor receptor mutation status in plasma of lung adenocarcinoma.

Authors:  Chao Shi; Yan Zheng; Yin Li; Haibo Sun; Shilei Liu
Journal:  J Clin Lab Anal       Date:  2017-07-03       Impact factor: 2.352

6.  Multiplex Detection of Rare Mutations by Picoliter Droplet Based Digital PCR: Sensitivity and Specificity Considerations.

Authors:  Eleonora Zonta; Fanny Garlan; Nicolas Pécuchet; Karla Perez-Toralla; Ouriel Caen; Coren Milbury; Audrey Didelot; Elizabeth Fabre; Hélène Blons; Pierre Laurent-Puig; Valérie Taly
Journal:  PLoS One       Date:  2016-07-14       Impact factor: 3.240

Review 7.  The evidence base for circulating tumour DNA blood-based biomarkers for the early detection of cancer: a systematic mapping review.

Authors:  Ian A Cree; Lesley Uttley; Helen Buckley Woods; Hugh Kikuchi; Anne Reiman; Susan Harnan; Becky L Whiteman; Sian Taylor Philips; Michael Messenger; Angela Cox; Dawn Teare; Orla Sheils; Jacqui Shaw
Journal:  BMC Cancer       Date:  2017-10-23       Impact factor: 4.430

8.  Characterization of Plasma Cell-Free DNA Integrity Using Droplet-Based Digital PCR: Toward the Development of Circulating Tumor DNA-Dedicated Assays.

Authors:  Geoffroy Poulet; Fanny Garlan; Sonia Garrigou; Eleonora Zonta; Leonor Benhaim; Marie-Jennifer Carrillon; Audrey Didelot; Delphine Le Corre; Claire Mulot; Philippe Nizard; Frederic Ginot; Audrey Boutonnet-Rodat; Helene Blons; Jean-Baptiste Bachet; Julien Taïeb; Aziz Zaanan; Vanna Geromel; Laurence Pellegrina; Pierre Laurent-Puig; Shu-Fang Wang-Renault; Valerie Taly
Journal:  Front Oncol       Date:  2021-05-06       Impact factor: 6.244

Review 9.  Cell-free DNA as a diagnostic marker for cancer: current insights.

Authors:  Samanta Salvi; Giorgia Gurioli; Ugo De Giorgi; Vincenza Conteduca; Gianluca Tedaldi; Daniele Calistri; Valentina Casadio
Journal:  Onco Targets Ther       Date:  2016-10-25       Impact factor: 4.147

10.  Evidence of intermetastatic heterogeneity for pathological response and genetic mutations within colorectal liver metastases following preoperative chemotherapy.

Authors:  Mylène Sebagh; Marc-Antoine Allard; Nelly Bosselut; Myriam Dao; Eric Vibert; Maïté Lewin; Antoinette Lemoine; Daniel Cherqui; René Adam; Antonio Sa Cunha
Journal:  Oncotarget       Date:  2016-04-19
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.